Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNX30Q5VWJ9 DYNLL1-208ENST00000550178 581 ntBASIC30.4■■■□□ 2.46
SNX30Q5VWJ9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SNX30Q5VWJ9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
SNX30Q5VWJ9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SNX30Q5VWJ9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SNX30Q5VWJ9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.34■■■□□ 2.45
SNX30Q5VWJ9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.33■■■□□ 2.45
SNX30Q5VWJ9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.32■■■□□ 2.44
SNX30Q5VWJ9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SNX30Q5VWJ9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.27■■■□□ 2.44
SNX30Q5VWJ9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
SNX30Q5VWJ9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.22■■■□□ 2.43
SNX30Q5VWJ9 AL031258.1-201ENST00000623562 325 ntBASIC30.22■■■□□ 2.43
SNX30Q5VWJ9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
SNX30Q5VWJ9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.19■■■□□ 2.42
SNX30Q5VWJ9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SNX30Q5VWJ9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
SNX30Q5VWJ9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
SNX30Q5VWJ9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SNX30Q5VWJ9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
SNX30Q5VWJ9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNX30Q5VWJ9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SNX30Q5VWJ9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNX30Q5VWJ9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.11■■■□□ 2.41
SNX30Q5VWJ9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
SNX30Q5VWJ9 AC145285.7-201ENST00000614819 1539 ntBASIC30.09■■■□□ 2.41
SNX30Q5VWJ9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNX30Q5VWJ9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SNX30Q5VWJ9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SNX30Q5VWJ9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SNX30Q5VWJ9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SNX30Q5VWJ9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SNX30Q5VWJ9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.98■■■□□ 2.39
SNX30Q5VWJ9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNX30Q5VWJ9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.95■■■□□ 2.39
SNX30Q5VWJ9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.95■■■□□ 2.39
SNX30Q5VWJ9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNX30Q5VWJ9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
SNX30Q5VWJ9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.93■■■□□ 2.38
SNX30Q5VWJ9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.93■■■□□ 2.38
SNX30Q5VWJ9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.91■■■□□ 2.38
SNX30Q5VWJ9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SNX30Q5VWJ9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.89■■■□□ 2.38
SNX30Q5VWJ9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.89■■■□□ 2.38
SNX30Q5VWJ9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SNX30Q5VWJ9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SNX30Q5VWJ9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SNX30Q5VWJ9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SNX30Q5VWJ9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SNX30Q5VWJ9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.77■■■□□ 2.36
SNX30Q5VWJ9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.74■■■□□ 2.35
SNX30Q5VWJ9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.72■■■□□ 2.35
SNX30Q5VWJ9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
SNX30Q5VWJ9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNX30Q5VWJ9 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.68■■■□□ 2.34
SNX30Q5VWJ9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.68■■■□□ 2.34
SNX30Q5VWJ9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SNX30Q5VWJ9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SNX30Q5VWJ9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
SNX30Q5VWJ9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SNX30Q5VWJ9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
SNX30Q5VWJ9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
SNX30Q5VWJ9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNX30Q5VWJ9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNX30Q5VWJ9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
SNX30Q5VWJ9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNX30Q5VWJ9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
SNX30Q5VWJ9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNX30Q5VWJ9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.54■■■□□ 2.32
SNX30Q5VWJ9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.54■■■□□ 2.32
SNX30Q5VWJ9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SNX30Q5VWJ9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.53■■■□□ 2.32
SNX30Q5VWJ9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
SNX30Q5VWJ9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SNX30Q5VWJ9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SNX30Q5VWJ9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SNX30Q5VWJ9 RARRES2P7-201ENST00000567349 469 ntBASIC29.5■■■□□ 2.31
SNX30Q5VWJ9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.49■■■□□ 2.31
SNX30Q5VWJ9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNX30Q5VWJ9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.47■■■□□ 2.31
SNX30Q5VWJ9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNX30Q5VWJ9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.46■■■□□ 2.31
SNX30Q5VWJ9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.42■■■□□ 2.3
SNX30Q5VWJ9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.39■■■□□ 2.3
SNX30Q5VWJ9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.38■■■□□ 2.29
SNX30Q5VWJ9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SNX30Q5VWJ9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SNX30Q5VWJ9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNX30Q5VWJ9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNX30Q5VWJ9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNX30Q5VWJ9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.31■■■□□ 2.28
SNX30Q5VWJ9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
SNX30Q5VWJ9 SETD8P1-201ENST00000623146 1180 ntBASIC29.31■■■□□ 2.28
SNX30Q5VWJ9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.3■■■□□ 2.28
SNX30Q5VWJ9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.29■■■□□ 2.28
SNX30Q5VWJ9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
SNX30Q5VWJ9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SNX30Q5VWJ9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.24■■■□□ 2.27
SNX30Q5VWJ9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms