Protein–RNA interactions for Protein: Q03880

PKR1, V-type ATPase assembly factor PKR1, yeastyeast

Known RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PKR1Q03880 GIS3YLR094C 1509 nt9.59□□□□□ -0.87
PKR1Q03880 BOP3YNL042W 1191 nt9.57□□□□□ -0.88
PKR1Q03880 YBL100CYBL100C 315 nt9.52□□□□□ -0.89
PKR1Q03880 MCH5YOR306C 1566 nt9.51□□□□□ -0.89
PKR1Q03880 RRT12YCR045C 1476 nt9.4□□□□□ -0.9
PKR1Q03880 FUN26YAL022C 1554 nt9.39□□□□□ -0.91
PKR1Q03880 NCP1YHR042W 2076 nt9.39□□□□□ -0.91
PKR1Q03880 BDH2YAL061W 1254 nt9.37□□□□□ -0.91
PKR1Q03880 SIS1YNL007C 1059 nt9.37□□□□□ -0.91
PKR1Q03880 ALG12YNR030W 1656 nt9.36□□□□□ -0.91
PKR1Q03880 SPT8YLR055C 1809 nt9.36□□□□□ -0.91
PKR1Q03880 ALF1YNL148C 765 nt9.35□□□□□ -0.91
PKR1Q03880 GFD2YCL036W 1701 nt9.34□□□□□ -0.91
PKR1Q03880 RPM1RPM1 483 nt9.32□□□□□ -0.92
PKR1Q03880 TRM9YML014W 840 nt9.29□□□□□ -0.92
PKR1Q03880 YFL054CYFL054C 1941 nt9.29□□□□□ -0.92
PKR1Q03880 HSP60YLR259C 1719 nt9.28□□□□□ -0.92
PKR1Q03880 RTS2YOR077W 699 nt9.26□□□□□ -0.93
PKR1Q03880 CUE1YMR264W 612 nt9.25□□□□□ -0.93
PKR1Q03880 ART5YGR068C 1761 nt9.24□□□□□ -0.93
PKR1Q03880 CCT6YDR188W 1641 nt9.23□□□□□ -0.93
PKR1Q03880 SUF2tP(AGG)C 72 nt9.21□□□□□ -0.94
PKR1Q03880 SUF10tP(AGG)N 72 nt9.21□□□□□ -0.94
PKR1Q03880 SRB2YHR041C 633 nt9.21□□□□□ -0.94
PKR1Q03880 LSM3YLR438C-A 270 nt9.21□□□□□ -0.94
PKR1Q03880 YNL195CYNL195C 786 nt9.2□□□□□ -0.94
PKR1Q03880 PET9YBL030C 957 nt9.16□□□□□ -0.94
PKR1Q03880 SWE1YJL187C 2460 nt9.13□□□□□ -0.95
PKR1Q03880 WWM1YFL010C 636 nt9.08□□□□□ -0.96
PKR1Q03880 PST2YDR032C 597 nt9.07□□□□□ -0.96
PKR1Q03880 GLK1YCL040W 1503 nt9.06□□□□□ -0.96
PKR1Q03880 YIL100WYIL100W 354 nt9.05□□□□□ -0.96
PKR1Q03880 YFL021C-AYFL021C-A 855 nt9.03□□□□□ -0.96
PKR1Q03880 NAR1YNL240C 1476 nt9.02□□□□□ -0.96
PKR1Q03880 YCH1YGR203W 447 nt9.02□□□□□ -0.97
PKR1Q03880 HSL7YBR133C 2484 nt9.01□□□□□ -0.97
PKR1Q03880 YGR021WYGR021W 873 nt9□□□□□ -0.97
PKR1Q03880 LCB1YMR296C 1677 nt8.99□□□□□ -0.97
PKR1Q03880 DSK2YMR276W 1122 nt8.96□□□□□ -0.98
PKR1Q03880 RDN25-1RDN25-1 3396 nt8.96□□□□□ -0.98
PKR1Q03880 RDN25-2RDN25-2 3396 nt8.96□□□□□ -0.98
PKR1Q03880 TIR4YOR009W 1464 nt8.93□□□□□ -0.98
PKR1Q03880 PBP1YGR178C 2169 nt8.91□□□□□ -0.98
PKR1Q03880 FUR4YBR021W 1902 nt8.9□□□□□ -0.99
PKR1Q03880 HOM6YJR139C 1080 nt8.88□□□□□ -0.99
PKR1Q03880 YLR236CYLR236C 324 nt8.88□□□□□ -0.99
PKR1Q03880 AAC1YMR056C 930 nt8.87□□□□□ -0.99
PKR1Q03880 LYS4YDR234W 2082 nt8.86□□□□□ -0.99
PKR1Q03880 BIO4YNR057C 714 nt8.86□□□□□ -0.99
PKR1Q03880 YMR057CYMR057C 372 nt8.85□□□□□ -0.99
PKR1Q03880 CYT2YKL087C 675 nt8.84□□□□□ -0.99
PKR1Q03880 BIO5YNR056C 1686 nt8.83□□□□□ -1
PKR1Q03880 PRP4YPR178W 1398 nt8.82□□□□□ -1
PKR1Q03880 YEL076C-AYEL076C-A 651 nt8.8□□□□□ -1
PKR1Q03880 YEL076CYEL076C 651 nt8.8□□□□□ -1
PKR1Q03880 YLR464WYLR464W 651 nt8.8□□□□□ -1
PKR1Q03880 DPS1YLL018C 1674 nt8.79□□□□□ -1
PKR1Q03880 CMP2YML057W 1815 nt8.77□□□□□ -1
PKR1Q03880 DED1YOR204W 1815 nt8.77□□□□□ -1
PKR1Q03880 SHU1YHL006C 453 nt8.76□□□□□ -1.01
PKR1Q03880 SNF1YDR477W 1902 nt8.76□□□□□ -1.01
PKR1Q03880 RKM5YLR137W 1104 nt8.75□□□□□ -1.01
PKR1Q03880 YAL037C-BYAL037C-B 975 nt8.72□□□□□ -1.01
PKR1Q03880 MNP1YGL068W 585 nt8.69□□□□□ -1.02
PKR1Q03880 NPL3YDR432W 1245 nt8.65□□□□□ -1.02
PKR1Q03880 YCL048W-AYCL048W-A 240 nt8.64□□□□□ -1.03
PKR1Q03880 HEL2YDR266C 1920 nt8.62□□□□□ -1.03
PKR1Q03880 YJL152WYJL152W 360 nt8.62□□□□□ -1.03
PKR1Q03880 YLR154C-GYLR154C-G 150 nt8.61□□□□□ -1.03
PKR1Q03880 YKR005CYKR005C 1578 nt8.61□□□□□ -1.03
PKR1Q03880 BMT6YLR063W 1098 nt8.6□□□□□ -1.03
PKR1Q03880 YAT1YAR035W 2064 nt8.6□□□□□ -1.03
PKR1Q03880 CCA1YER168C 1641 nt8.59□□□□□ -1.03
PKR1Q03880 SIM1YIL123W 1431 nt8.57□□□□□ -1.04
PKR1Q03880 YHR056W-AYHR056W-A 435 nt8.57□□□□□ -1.04
PKR1Q03880 NDI1YML120C 1542 nt8.56□□□□□ -1.04
PKR1Q03880 MOT3YMR070W 1473 nt8.55□□□□□ -1.04
PKR1Q03880 MET2YNL277W 1461 nt8.53□□□□□ -1.04
PKR1Q03880 FRE6YLL051C 2139 nt8.53□□□□□ -1.04
PKR1Q03880 IRC24YIR036C 792 nt8.52□□□□□ -1.05
PKR1Q03880 YKL097CYKL097C 411 nt8.5□□□□□ -1.05
PKR1Q03880 YOL037CYOL037C 354 nt8.5□□□□□ -1.05
PKR1Q03880 WSC2YNL283C 1512 nt8.48□□□□□ -1.05
PKR1Q03880 CRR1YLR213C 1269 nt8.47□□□□□ -1.05
PKR1Q03880 FMP52YER004W 696 nt8.46□□□□□ -1.06
PKR1Q03880 PCM1YEL058W 1674 nt8.46□□□□□ -1.06
PKR1Q03880 SSN3YPL042C 1668 nt8.44□□□□□ -1.06
PKR1Q03880 SNG1YGR197C 1644 nt8.43□□□□□ -1.06
PKR1Q03880 YGR259CYGR259C 441 nt8.43□□□□□ -1.06
PKR1Q03880 SPT20YOL148C 1815 nt8.43□□□□□ -1.06
PKR1Q03880 ERF2YLR246W 1080 nt8.42□□□□□ -1.06
PKR1Q03880 GID7YCL039W 2238 nt8.42□□□□□ -1.06
PKR1Q03880 RAX1YOR301W 1308 nt8.41□□□□□ -1.06
PKR1Q03880 RRD1YIL153W 1182 nt8.41□□□□□ -1.06
PKR1Q03880 YLR281CYLR281C 468 nt8.38□□□□□ -1.07
PKR1Q03880 IDH1YNL037C 1083 nt8.38□□□□□ -1.07
PKR1Q03880 MIC10YCL057C-A 294 nt8.35□□□□□ -1.07
PKR1Q03880 TCD2YKL027W 1344 nt8.34□□□□□ -1.07
PKR1Q03880 YGL114WYGL114W 2178 nt8.34□□□□□ -1.07
PKR1Q03880 WHI5YOR083W 888 nt8.34□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms