Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.04■■□□□ 1.92
RPP38P78345 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
RPP38P78345 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
RPP38P78345 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RPP38P78345 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RPP38P78345 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.91■■□□□ 1.9
RPP38P78345 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RPP38P78345 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.88■■□□□ 1.89
RPP38P78345 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RPP38P78345 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
RPP38P78345 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RPP38P78345 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RPP38P78345 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RPP38P78345 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
RPP38P78345 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RPP38P78345 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RPP38P78345 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
RPP38P78345 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RPP38P78345 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPP38P78345 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.74■■□□□ 1.87
RPP38P78345 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.74■■□□□ 1.87
RPP38P78345 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPP38P78345 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RPP38P78345 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.72■■□□□ 1.87
RPP38P78345 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RPP38P78345 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RPP38P78345 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RPP38P78345 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
RPP38P78345 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPP38P78345 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
RPP38P78345 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.67■■□□□ 1.86
RPP38P78345 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.66■■□□□ 1.86
RPP38P78345 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.66■■□□□ 1.86
RPP38P78345 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPP38P78345 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
RPP38P78345 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.63■■□□□ 1.85
RPP38P78345 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.62■■□□□ 1.85
RPP38P78345 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
RPP38P78345 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RPP38P78345 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RPP38P78345 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.6■■□□□ 1.85
RPP38P78345 AP002365.1-201ENST00000603448 772 ntBASIC26.58■■□□□ 1.85
RPP38P78345 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RPP38P78345 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
RPP38P78345 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.55■■□□□ 1.84
RPP38P78345 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.55■■□□□ 1.84
RPP38P78345 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.54■■□□□ 1.84
RPP38P78345 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RPP38P78345 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RPP38P78345 AC145285.7-201ENST00000614819 1539 ntBASIC26.52■■□□□ 1.84
RPP38P78345 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RPP38P78345 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
RPP38P78345 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RPP38P78345 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RPP38P78345 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
RPP38P78345 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RPP38P78345 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RPP38P78345 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RPP38P78345 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RPP38P78345 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
RPP38P78345 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
RPP38P78345 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.4■■□□□ 1.82
RPP38P78345 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RPP38P78345 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.82
RPP38P78345 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.39■■□□□ 1.82
RPP38P78345 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RPP38P78345 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RPP38P78345 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPP38P78345 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RPP38P78345 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.35■■□□□ 1.81
RPP38P78345 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.35■■□□□ 1.81
RPP38P78345 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RPP38P78345 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RPP38P78345 DYNLL1-208ENST00000550178 581 ntBASIC26.34■■□□□ 1.81
RPP38P78345 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
RPP38P78345 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPP38P78345 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPP38P78345 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.31■■□□□ 1.8
RPP38P78345 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPP38P78345 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPP38P78345 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPP38P78345 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.28■■□□□ 1.8
RPP38P78345 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPP38P78345 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.26■■□□□ 1.79
RPP38P78345 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPP38P78345 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.25■■□□□ 1.79
RPP38P78345 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RPP38P78345 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RPP38P78345 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPP38P78345 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPP38P78345 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.22■■□□□ 1.79
RPP38P78345 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RPP38P78345 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.19■■□□□ 1.78
RPP38P78345 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
RPP38P78345 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
RPP38P78345 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RPP38P78345 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RPP38P78345 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RPP38P78345 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
RPP38P78345 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms