Protein–RNA interactions for Protein: P40046

VTC1, Vacuolar transporter chaperone 1, yeastyeast

RIP-Chip data

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTC1P40046 SIS1YNL007C 1059 nt8.93□□□□□ -0.98
VTC1P40046 RTF1YGL244W 1677 nt8.92□□□□□ -0.98
VTC1P40046 GFD2YCL036W 1701 nt8.9□□□□□ -0.98
VTC1P40046 CCT6YDR188W 1641 nt8.88□□□□□ -0.99
VTC1P40046 TRM9YML014W 840 nt8.88□□□□□ -0.99
VTC1P40046 RTS2YOR077W 699 nt8.86□□□□□ -0.99
VTC1P40046 ART5YGR068C 1761 nt8.85□□□□□ -0.99
VTC1P40046 RDN37-1RDN37-1 5354 nt8.84□□□□□ -0.99
VTC1P40046 RDN37-2RDN37-2 5354 nt8.84□□□□□ -0.99
VTC1P40046 PTK1YKL198C 1989 nt8.84□□□□□ -0.99
VTC1P40046 RRT12YCR045C 1476 nt8.83□□□□□ -1
VTC1P40046 LSM3YLR438C-A 270 nt8.82□□□□□ -1
VTC1P40046 BOP3YNL042W 1191 nt8.8□□□□□ -1
VTC1P40046 SUF2tP(AGG)C 72 nt8.78□□□□□ -1
VTC1P40046 SUF10tP(AGG)N 72 nt8.78□□□□□ -1
VTC1P40046 WWM1YFL010C 636 nt8.77□□□□□ -1.01
VTC1P40046 YGR021WYGR021W 873 nt8.77□□□□□ -1.01
VTC1P40046 CUE1YMR264W 612 nt8.76□□□□□ -1.01
VTC1P40046 PET9YBL030C 957 nt8.74□□□□□ -1.01
VTC1P40046 YFL021C-AYFL021C-A 855 nt8.73□□□□□ -1.01
VTC1P40046 NCP1YHR042W 2076 nt8.69□□□□□ -1.02
VTC1P40046 FPS1YLL043W 2010 nt8.69□□□□□ -1.02
VTC1P40046 SHU1YHL006C 453 nt8.68□□□□□ -1.02
VTC1P40046 YNL195CYNL195C 786 nt8.66□□□□□ -1.02
VTC1P40046 UME6YDR207C 2511 nt8.66□□□□□ -1.02
VTC1P40046 HOM6YJR139C 1080 nt8.65□□□□□ -1.02
VTC1P40046 TIR4YOR009W 1464 nt8.64□□□□□ -1.03
VTC1P40046 BOR1YNL275W 1731 nt8.61□□□□□ -1.03
VTC1P40046 YCH1YGR203W 447 nt8.61□□□□□ -1.03
VTC1P40046 YIL100WYIL100W 354 nt8.6□□□□□ -1.03
VTC1P40046 YKL097CYKL097C 411 nt8.58□□□□□ -1.04
VTC1P40046 SPT8YLR055C 1809 nt8.58□□□□□ -1.04
VTC1P40046 YFL054CYFL054C 1941 nt8.58□□□□□ -1.04
VTC1P40046 YAL037C-BYAL037C-B 975 nt8.57□□□□□ -1.04
VTC1P40046 YMR057CYMR057C 372 nt8.56□□□□□ -1.04
VTC1P40046 RKM5YLR137W 1104 nt8.53□□□□□ -1.04
VTC1P40046 MNP1YGL068W 585 nt8.51□□□□□ -1.05
VTC1P40046 YLR236CYLR236C 324 nt8.48□□□□□ -1.05
VTC1P40046 LCB1YMR296C 1677 nt8.47□□□□□ -1.05
VTC1P40046 HSP60YLR259C 1719 nt8.41□□□□□ -1.06
VTC1P40046 YOL037CYOL037C 354 nt8.41□□□□□ -1.06
VTC1P40046 SWE1YJL187C 2460 nt8.41□□□□□ -1.06
VTC1P40046 MCH5YOR306C 1566 nt8.4□□□□□ -1.06
VTC1P40046 NPL3YDR432W 1245 nt8.36□□□□□ -1.07
VTC1P40046 ALG12YNR030W 1656 nt8.34□□□□□ -1.07
VTC1P40046 LYS4YDR234W 2082 nt8.32□□□□□ -1.08
VTC1P40046 YLR154C-GYLR154C-G 150 nt8.31□□□□□ -1.08
VTC1P40046 YCL048W-AYCL048W-A 240 nt8.29□□□□□ -1.08
VTC1P40046 YJL152WYJL152W 360 nt8.28□□□□□ -1.08
VTC1P40046 GLK1YCL040W 1503 nt8.26□□□□□ -1.09
VTC1P40046 MOT3YMR070W 1473 nt8.2□□□□□ -1.1 RIP-Chip
VTC1P40046 YOR139CYOR139C 393 nt8.2□□□□□ -1.1
VTC1P40046 SIM1YIL123W 1431 nt8.19□□□□□ -1.1
VTC1P40046 FUR4YBR021W 1902 nt8.19□□□□□ -1.1 RIP-Chip
VTC1P40046 RRD1YIL153W 1182 nt8.18□□□□□ -1.1
VTC1P40046 WHI5YOR083W 888 nt8.17□□□□□ -1.1
VTC1P40046 YLR281CYLR281C 468 nt8.16□□□□□ -1.1
VTC1P40046 BIO4YNR057C 714 nt8.15□□□□□ -1.1
VTC1P40046 PCM1YEL058W 1674 nt8.14□□□□□ -1.11
VTC1P40046 FMP52YER004W 696 nt8.12□□□□□ -1.11
VTC1P40046 IMP2'YIL154C 1041 nt8.11□□□□□ -1.11
VTC1P40046 IDH1YNL037C 1083 nt8.11□□□□□ -1.11
VTC1P40046 NAR1YNL240C 1476 nt8.1□□□□□ -1.11
VTC1P40046 DED1YOR204W 1815 nt8.08□□□□□ -1.12
VTC1P40046 DSK2YMR276W 1122 nt8.07□□□□□ -1.12
VTC1P40046 PRP4YPR178W 1398 nt8.07□□□□□ -1.12
VTC1P40046 YHR056W-AYHR056W-A 435 nt8.06□□□□□ -1.12
VTC1P40046 FMT1YBL013W 1206 nt8.06□□□□□ -1.12
VTC1P40046 AAC1YMR056C 930 nt8.06□□□□□ -1.12
VTC1P40046 CCA1YER168C 1641 nt8.05□□□□□ -1.12
VTC1P40046 YEL076C-AYEL076C-A 651 nt8.05□□□□□ -1.12
VTC1P40046 YEL076CYEL076C 651 nt8.05□□□□□ -1.12
VTC1P40046 CRR1YLR213C 1269 nt8.05□□□□□ -1.12
VTC1P40046 YLR464WYLR464W 651 nt8.05□□□□□ -1.12 RIP-Chip
VTC1P40046 DPS1YLL018C 1674 nt8.05□□□□□ -1.12
VTC1P40046 GBP2YCL011C 1284 nt8.04□□□□□ -1.12
VTC1P40046 BIO5YNR056C 1686 nt8.02□□□□□ -1.13
VTC1P40046 ADH2YMR303C 1047 nt8.02□□□□□ -1.13
VTC1P40046 TCD2YKL027W 1344 nt8.02□□□□□ -1.13
VTC1P40046 ERF2YLR246W 1080 nt8.01□□□□□ -1.13
VTC1P40046 SNF1YDR477W 1902 nt8□□□□□ -1.13
VTC1P40046 PBP1YGR178C 2169 nt8□□□□□ -1.13
VTC1P40046 PUS2YGL063W 1113 nt7.99□□□□□ -1.13
VTC1P40046 SNF6YHL025W 999 nt7.99□□□□□ -1.13
VTC1P40046 MIC10YCL057C-A 294 nt7.98□□□□□ -1.13
VTC1P40046 CWP1YKL096W 720 nt7.97□□□□□ -1.13
VTC1P40046 RPM1RPM1 483 nt7.94□□□□□ -1.14
VTC1P40046 RAX1YOR301W 1308 nt7.94□□□□□ -1.14
VTC1P40046 YKR005CYKR005C 1578 nt7.93□□□□□ -1.14
VTC1P40046 CYT2YKL087C 675 nt7.93□□□□□ -1.14
VTC1P40046 HEM12YDR047W 1089 nt7.92□□□□□ -1.14
VTC1P40046 tM(CAU)CtM(CAU)C 72 nt7.92□□□□□ -1.14
VTC1P40046 IMT4tM(CAU)E 72 nt7.92□□□□□ -1.14
VTC1P40046 IMT3tM(CAU)J3 72 nt7.92□□□□□ -1.14
VTC1P40046 IMT1tM(CAU)O1 72 nt7.92□□□□□ -1.14
VTC1P40046 IMT2tM(CAU)P 72 nt7.92□□□□□ -1.14
VTC1P40046 YIH1YCR059C 777 nt7.91□□□□□ -1.14
VTC1P40046 ATF2YGR177C 1608 nt7.91□□□□□ -1.14
VTC1P40046 SNG1YGR197C 1644 nt7.9□□□□□ -1.14
VTC1P40046 YDR433WYDR433W 441 nt7.9□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 21.9 ms