Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 TRM9YML014W 840 nt9.68□□□□□ -0.86
VMA16P23968 RPP2AYOL039W 321 nt9.65□□□□□ -0.86
VMA16P23968 PTK1YKL198C 1989 nt9.64□□□□□ -0.87
VMA16P23968 YKL097CYKL097C 411 nt9.63□□□□□ -0.87
VMA16P23968 SHU1YHL006C 453 nt9.61□□□□□ -0.87
VMA16P23968 WWM1YFL010C 636 nt9.6□□□□□ -0.87
VMA16P23968 SUF2tP(AGG)C 72 nt9.6□□□□□ -0.87
VMA16P23968 SUF10tP(AGG)N 72 nt9.6□□□□□ -0.87
VMA16P23968 LSM3YLR438C-A 270 nt9.58□□□□□ -0.88
VMA16P23968 HSP60YLR259C 1719 nt9.57□□□□□ -0.88
VMA16P23968 BOP3YNL042W 1191 nt9.57□□□□□ -0.88
VMA16P23968 SCC4YER147C 1875 nt9.57□□□□□ -0.88
VMA16P23968 NAR1YNL240C 1476 nt9.53□□□□□ -0.88
VMA16P23968 CCT6YDR188W 1641 nt9.53□□□□□ -0.88
VMA16P23968 PTP1YDL230W 1008 nt9.53□□□□□ -0.88
VMA16P23968 YSC84YHR016C 1407 nt9.52□□□□□ -0.89
VMA16P23968 CAC2YML102W 1407 nt9.52□□□□□ -0.89
VMA16P23968 YGR021WYGR021W 873 nt9.51□□□□□ -0.89
VMA16P23968 YFL021C-AYFL021C-A 855 nt9.49□□□□□ -0.89
VMA16P23968 HSL7YBR133C 2484 nt9.47□□□□□ -0.89
VMA16P23968 SIS1YNL007C 1059 nt9.46□□□□□ -0.9
VMA16P23968 HOM6YJR139C 1080 nt9.45□□□□□ -0.9
VMA16P23968 YAL037C-BYAL037C-B 975 nt9.45□□□□□ -0.9
VMA16P23968 DED1YOR204W 1815 nt9.44□□□□□ -0.9
VMA16P23968 SPT8YLR055C 1809 nt9.43□□□□□ -0.9
VMA16P23968 YHL050CYHL050C 2094 nt9.42□□□□□ -0.9
VMA16P23968 CMP2YML057W 1815 nt9.4□□□□□ -0.9
VMA16P23968 IRC15YPL017C 1500 nt9.38□□□□□ -0.91
VMA16P23968 HEL2YDR266C 1920 nt9.38□□□□□ -0.91
VMA16P23968 GIS3YLR094C 1509 nt9.37□□□□□ -0.91
VMA16P23968 YFL054CYFL054C 1941 nt9.36□□□□□ -0.91
VMA16P23968 ART5YGR068C 1761 nt9.35□□□□□ -0.91
VMA16P23968 MNP1YGL068W 585 nt9.33□□□□□ -0.92
VMA16P23968 RTS2YOR077W 699 nt9.33□□□□□ -0.92
VMA16P23968 GFD2YCL036W 1701 nt9.33□□□□□ -0.92
VMA16P23968 PET9YBL030C 957 nt9.32□□□□□ -0.92
VMA16P23968 YNL195CYNL195C 786 nt9.32□□□□□ -0.92
VMA16P23968 RKM5YLR137W 1104 nt9.31□□□□□ -0.92
VMA16P23968 YCH1YGR203W 447 nt9.3□□□□□ -0.92
VMA16P23968 DSK2YMR276W 1122 nt9.3□□□□□ -0.92
VMA16P23968 RDN25-1RDN25-1 3396 nt9.3□□□□□ -0.92
VMA16P23968 RDN25-2RDN25-2 3396 nt9.3□□□□□ -0.92
VMA16P23968 GLK1YCL040W 1503 nt9.3□□□□□ -0.92
VMA16P23968 LCB1YMR296C 1677 nt9.29□□□□□ -0.92
VMA16P23968 RDN37-1RDN37-1 5354 nt9.27□□□□□ -0.93
VMA16P23968 RDN37-2RDN37-2 5354 nt9.27□□□□□ -0.93
VMA16P23968 MET2YNL277W 1461 nt9.27□□□□□ -0.93
VMA16P23968 YIL100WYIL100W 354 nt9.25□□□□□ -0.93
VMA16P23968 CUE1YMR264W 612 nt9.23□□□□□ -0.93
VMA16P23968 YOL037CYOL037C 354 nt9.23□□□□□ -0.93
VMA16P23968 YAT1YAR035W 2064 nt9.23□□□□□ -0.93
VMA16P23968 NPL3YDR432W 1245 nt9.21□□□□□ -0.94
VMA16P23968 SFP1YLR403W 2052 nt9.2□□□□□ -0.94
VMA16P23968 TIR4YOR009W 1464 nt9.2□□□□□ -0.94
VMA16P23968 YOR139CYOR139C 393 nt9.18□□□□□ -0.94
VMA16P23968 RRT12YCR045C 1476 nt9.17□□□□□ -0.94
VMA16P23968 CYT2YKL087C 675 nt9.16□□□□□ -0.94
VMA16P23968 SSN3YPL042C 1668 nt9.16□□□□□ -0.94
VMA16P23968 YLR236CYLR236C 324 nt9.15□□□□□ -0.94
VMA16P23968 YMR057CYMR057C 372 nt9.15□□□□□ -0.94
VMA16P23968 NPP1YCR026C 2229 nt9.13□□□□□ -0.95
VMA16P23968 AAC1YMR056C 930 nt9.13□□□□□ -0.95
VMA16P23968 GID7YCL039W 2238 nt9.13□□□□□ -0.95
VMA16P23968 PBP1YGR178C 2169 nt9.13□□□□□ -0.95
VMA16P23968 YJL152WYJL152W 360 nt9.11□□□□□ -0.95
VMA16P23968 NCP1YHR042W 2076 nt9.09□□□□□ -0.95
VMA16P23968 YCL048W-AYCL048W-A 240 nt9.09□□□□□ -0.95
VMA16P23968 SWE1YJL187C 2460 nt9.09□□□□□ -0.95
VMA16P23968 YLR154C-GYLR154C-G 150 nt9.07□□□□□ -0.96
VMA16P23968 FRE6YLL051C 2139 nt9.05□□□□□ -0.96
VMA16P23968 BIO5YNR056C 1686 nt9.04□□□□□ -0.96
VMA16P23968 YLR281CYLR281C 468 nt9.03□□□□□ -0.96
VMA16P23968 PRP4YPR178W 1398 nt8.99□□□□□ -0.97
VMA16P23968 MAE1YKL029C 2010 nt8.97□□□□□ -0.97
VMA16P23968 NDI1YML120C 1542 nt8.95□□□□□ -0.98
VMA16P23968 WHI5YOR083W 888 nt8.94□□□□□ -0.98
VMA16P23968 DPS1YLL018C 1674 nt8.93□□□□□ -0.98
VMA16P23968 FUR4YBR021W 1902 nt8.93□□□□□ -0.98
VMA16P23968 HMG2YLR450W 3138 nt8.91□□□□□ -0.98
VMA16P23968 YEL076C-AYEL076C-A 651 nt8.91□□□□□ -0.98
VMA16P23968 YEL076CYEL076C 651 nt8.91□□□□□ -0.98
VMA16P23968 YLR464WYLR464W 651 nt8.91□□□□□ -0.98
VMA16P23968 TPO4YOR273C 1980 nt8.91□□□□□ -0.98
VMA16P23968 RIM8YGL045W 1629 nt8.91□□□□□ -0.98
VMA16P23968 SNG1YGR197C 1644 nt8.89□□□□□ -0.99
VMA16P23968 UGA4YDL210W 1716 nt8.86□□□□□ -0.99
VMA16P23968 PUS2YGL063W 1113 nt8.85□□□□□ -0.99
VMA16P23968 tM(CAU)CtM(CAU)C 72 nt8.84□□□□□ -0.99
VMA16P23968 IMT4tM(CAU)E 72 nt8.84□□□□□ -0.99
VMA16P23968 IMT3tM(CAU)J3 72 nt8.84□□□□□ -0.99
VMA16P23968 IMT1tM(CAU)O1 72 nt8.84□□□□□ -0.99
VMA16P23968 IMT2tM(CAU)P 72 nt8.84□□□□□ -0.99
VMA16P23968 SNF1YDR477W 1902 nt8.83□□□□□ -1
VMA16P23968 ESBP6YNL125C 2022 nt8.82□□□□□ -1
VMA16P23968 IMP2'YIL154C 1041 nt8.82□□□□□ -1
VMA16P23968 IDH1YNL037C 1083 nt8.8□□□□□ -1
VMA16P23968 YGL114WYGL114W 2178 nt8.8□□□□□ -1
VMA16P23968 RRD1YIL153W 1182 nt8.79□□□□□ -1
VMA16P23968 BMT6YLR063W 1098 nt8.79□□□□□ -1
VMA16P23968 URA8YJR103W 1737 nt8.78□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms