Protein–RNA interactions for Protein: P21771

MRPS28, 37S ribosomal protein S28, mitochondrial, yeast

Predictions only

Length 286 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	P21771	YER088W-B	YER088W-B	147 nt		11.88	□□□□□ -0.51
MRPS28	P21771	SIS1	YNL007C	1059 nt		11.88	□□□□□ -0.51
MRPS28	P21771	RSB1	YOR049C	1065 nt		11.87	□□□□□ -0.51
MRPS28	P21771	BDH2	YAL061W	1254 nt		11.85	□□□□□ -0.51
MRPS28	P21771	RTS2	YOR077W	699 nt		11.83	□□□□□ -0.52
MRPS28	P21771	GFD2	YCL036W	1701 nt		11.82	□□□□□ -0.52
MRPS28	P21771	TRM9	YML014W	840 nt		11.81	□□□□□ -0.52
MRPS28	P21771	YNL195C	YNL195C	786 nt		11.8	□□□□□ -0.52
MRPS28	P21771	ART5	YGR068C	1761 nt		11.78	□□□□□ -0.52
MRPS28	P21771	YFL054C	YFL054C	1941 nt		11.76	□□□□□ -0.53
MRPS28	P21771	CCT6	YDR188W	1641 nt		11.72	□□□□□ -0.53
MRPS28	P21771	MCH5	YOR306C	1566 nt		11.72	□□□□□ -0.53
MRPS28	P21771	SUF2	tP(AGG)C	72 nt		11.72	□□□□□ -0.53
MRPS28	P21771	SUF10	tP(AGG)N	72 nt		11.72	□□□□□ -0.53
MRPS28	P21771	CUE1	YMR264W	612 nt		11.71	□□□□□ -0.53
MRPS28	P21771	SPT8	YLR055C	1809 nt		11.7	□□□□□ -0.54
MRPS28	P21771	NCP1	YHR042W	2076 nt		11.67	□□□□□ -0.54
MRPS28	P21771	YJL225C	YJL225C	5277 nt		11.66	□□□□□ -0.54
MRPS28	P21771	SRB2	YHR041C	633 nt		11.66	□□□□□ -0.54
MRPS28	P21771	PET9	YBL030C	957 nt		11.65	□□□□□ -0.54
MRPS28	P21771	ALG12	YNR030W	1656 nt		11.61	□□□□□ -0.55
MRPS28	P21771	YIL100W	YIL100W	354 nt		11.6	□□□□□ -0.55
MRPS28	P21771	HSP60	YLR259C	1719 nt		11.59	□□□□□ -0.55
MRPS28	P21771	PST2	YDR032C	597 nt		11.58	□□□□□ -0.56
MRPS28	P21771	LSM3	YLR438C-A	270 nt		11.52	□□□□□ -0.57
MRPS28	P21771	YCH1	YGR203W	447 nt		11.49	□□□□□ -0.57
MRPS28	P21771	SWE1	YJL187C	2460 nt		11.42	□□□□□ -0.58
MRPS28	P21771	GLK1	YCL040W	1503 nt		11.4	□□□□□ -0.59
MRPS28	P21771	YLR236C	YLR236C	324 nt		11.38	□□□□□ -0.59
MRPS28	P21771	YMR057C	YMR057C	372 nt		11.37	□□□□□ -0.59
MRPS28	P21771	TIR4	YOR009W	1464 nt		11.36	□□□□□ -0.59
MRPS28	P21771	WWM1	YFL010C	636 nt		11.32	□□□□□ -0.6
MRPS28	P21771	LCB1	YMR296C	1677 nt		11.32	□□□□□ -0.6
MRPS28	P21771	NAR1	YNL240C	1476 nt		11.28	□□□□□ -0.6
MRPS28	P21771	DSK2	YMR276W	1122 nt		11.23	□□□□□ -0.61
MRPS28	P21771	FUR4	YBR021W	1902 nt		11.16	□□□□□ -0.62
MRPS28	P21771	YFL021C-A	YFL021C-A	855 nt		11.15	□□□□□ -0.62
MRPS28	P21771	YKL097C	YKL097C	411 nt		11.15	□□□□□ -0.62
MRPS28	P21771	AAC1	YMR056C	930 nt		11.15	□□□□□ -0.62
MRPS28	P21771	PRP4	YPR178W	1398 nt		11.11	□□□□□ -0.63
MRPS28	P21771	LYS4	YDR234W	2082 nt		11.09	□□□□□ -0.63
MRPS28	P21771	YEL076C-A	YEL076C-A	651 nt		11.06	□□□□□ -0.64
MRPS28	P21771	YEL076C	YEL076C	651 nt		11.06	□□□□□ -0.64
MRPS28	P21771	YLR464W	YLR464W	651 nt		11.06	□□□□□ -0.64
MRPS28	P21771	BIO4	YNR057C	714 nt		11.06	□□□□□ -0.64
MRPS28	P21771	SHU1	YHL006C	453 nt		11.05	□□□□□ -0.64
MRPS28	P21771	DPS1	YLL018C	1674 nt		11.04	□□□□□ -0.64
MRPS28	P21771	YCL048W-A	YCL048W-A	240 nt		11.01	□□□□□ -0.65
MRPS28	P21771	BIO5	YNR056C	1686 nt		10.99	□□□□□ -0.65
MRPS28	P21771	CMP2	YML057W	1815 nt		10.99	□□□□□ -0.65
MRPS28	P21771	SIM1	YIL123W	1431 nt		10.99	□□□□□ -0.65
MRPS28	P21771	PBP1	YGR178C	2169 nt		10.96	□□□□□ -0.65
MRPS28	P21771	YGR021W	YGR021W	873 nt		10.96	□□□□□ -0.65
MRPS28	P21771	CYT2	YKL087C	675 nt		10.96	□□□□□ -0.65
MRPS28	P21771	BMT6	YLR063W	1098 nt		10.94	□□□□□ -0.66
MRPS28	P21771	RDN37-1	RDN37-1	5354 nt		10.94	□□□□□ -0.66
MRPS28	P21771	RDN37-2	RDN37-2	5354 nt		10.94	□□□□□ -0.66
MRPS28	P21771	SNF1	YDR477W	1902 nt		10.88	□□□□□ -0.67
MRPS28	P21771	YJL152W	YJL152W	360 nt		10.87	□□□□□ -0.67
MRPS28	P21771	HOM6	YJR139C	1080 nt		10.86	□□□□□ -0.67
MRPS28	P21771	HSL7	YBR133C	2484 nt		10.83	□□□□□ -0.68
MRPS28	P21771	NPL3	YDR432W	1245 nt		10.83	□□□□□ -0.68
MRPS28	P21771	YAL037C-B	YAL037C-B	975 nt		10.83	□□□□□ -0.68
MRPS28	P21771	CCA1	YER168C	1641 nt		10.83	□□□□□ -0.68
MRPS28	P21771	YKR005C	YKR005C	1578 nt		10.82	□□□□□ -0.68
MRPS28	P21771	YHR056W-A	YHR056W-A	435 nt		10.79	□□□□□ -0.68
MRPS28	P21771	PCM1	YEL058W	1674 nt		10.79	□□□□□ -0.68
MRPS28	P21771	FMP52	YER004W	696 nt		10.73	□□□□□ -0.69
MRPS28	P21771	RKM5	YLR137W	1104 nt		10.71	□□□□□ -0.69
MRPS28	P21771	RAX1	YOR301W	1308 nt		10.71	□□□□□ -0.69
MRPS28	P21771	IRC24	YIR036C	792 nt		10.7	□□□□□ -0.7
MRPS28	P21771	MNP1	YGL068W	585 nt		10.69	□□□□□ -0.7
MRPS28	P21771	ERF2	YLR246W	1080 nt		10.69	□□□□□ -0.7
MRPS28	P21771	YLR154C-G	YLR154C-G	150 nt		10.68	□□□□□ -0.7
MRPS28	P21771	YGR259C	YGR259C	441 nt		10.67	□□□□□ -0.7
MRPS28	P21771	RRD1	YIL153W	1182 nt		10.67	□□□□□ -0.7
MRPS28	P21771	CRR1	YLR213C	1269 nt		10.67	□□□□□ -0.7
MRPS28	P21771	YAT1	YAR035W	2064 nt		10.66	□□□□□ -0.7
MRPS28	P21771	WSC2	YNL283C	1512 nt		10.66	□□□□□ -0.7
MRPS28	P21771	NDI1	YML120C	1542 nt		10.65	□□□□□ -0.7
MRPS28	P21771	DED1	YOR204W	1815 nt		10.64	□□□□□ -0.71
MRPS28	P21771	HEL2	YDR266C	1920 nt		10.63	□□□□□ -0.71
MRPS28	P21771	HEM12	YDR047W	1089 nt		10.61	□□□□□ -0.71
MRPS28	P21771	YOR139C	YOR139C	393 nt		10.61	□□□□□ -0.71
MRPS28	P21771	SNF6	YHL025W	999 nt		10.6	□□□□□ -0.71
MRPS28	P21771	YOL037C	YOL037C	354 nt		10.6	□□□□□ -0.71
MRPS28	P21771	MIC10	YCL057C-A	294 nt		10.59	□□□□□ -0.71
MRPS28	P21771	RDN25-1	RDN25-1	3396 nt		10.58	□□□□□ -0.72
MRPS28	P21771	RDN25-2	RDN25-2	3396 nt		10.58	□□□□□ -0.72
MRPS28	P21771	YCL074W	YCL074W	927 nt		10.54	□□□□□ -0.72
MRPS28	P21771	ADH2	YMR303C	1047 nt		10.54	□□□□□ -0.72
MRPS28	P21771	DUS1	YML080W	1272 nt		10.53	□□□□□ -0.72
MRPS28	P21771	CWP1	YKL096W	720 nt		10.51	□□□□□ -0.73
MRPS28	P21771	SPT20	YOL148C	1815 nt		10.5	□□□□□ -0.73
MRPS28	P21771	YLR281C	YLR281C	468 nt		10.5	□□□□□ -0.73
MRPS28	P21771	SNG1	YGR197C	1644 nt		10.49	□□□□□ -0.73
MRPS28	P21771	FMT1	YBL013W	1206 nt		10.48	□□□□□ -0.73
MRPS28	P21771	ATF2	YGR177C	1608 nt		10.46	□□□□□ -0.74
MRPS28	P21771	TCD2	YKL027W	1344 nt		10.43	□□□□□ -0.74
MRPS28	P21771	IMP2'	YIL154C	1041 nt		10.43	□□□□□ -0.74

Retrieved 100 of 7,029 protein–RNA pairs in 42 ms