Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 YBL100CYBL100C 315 nt9.01□□□□□ -0.97
CDC43P18898 YSC84YHR016C 1407 nt9□□□□□ -0.97
CDC43P18898 IRC15YPL017C 1500 nt8.99□□□□□ -0.97
CDC43P18898 YHL050CYHL050C 2094 nt8.98□□□□□ -0.97
CDC43P18898 BDH2YAL061W 1254 nt8.93□□□□□ -0.98
CDC43P18898 BOP3YNL042W 1191 nt8.92□□□□□ -0.98
CDC43P18898 GIS3YLR094C 1509 nt8.91□□□□□ -0.98
CDC43P18898 RPP2AYOL039W 321 nt8.91□□□□□ -0.98
CDC43P18898 FUN26YAL022C 1554 nt8.9□□□□□ -0.98
CDC43P18898 ALF1YNL148C 765 nt8.85□□□□□ -0.99
CDC43P18898 TRM9YML014W 840 nt8.83□□□□□ -1
CDC43P18898 ALG12YNR030W 1656 nt8.83□□□□□ -1
CDC43P18898 SRB2YHR041C 633 nt8.82□□□□□ -1
CDC43P18898 SIS1YNL007C 1059 nt8.8□□□□□ -1
CDC43P18898 LSM3YLR438C-A 270 nt8.79□□□□□ -1
CDC43P18898 CCT6YDR188W 1641 nt8.79□□□□□ -1
CDC43P18898 RRT12YCR045C 1476 nt8.77□□□□□ -1.01
CDC43P18898 SPT8YLR055C 1809 nt8.76□□□□□ -1.01
CDC43P18898 SUF2tP(AGG)C 72 nt8.75□□□□□ -1.01
CDC43P18898 SUF10tP(AGG)N 72 nt8.75□□□□□ -1.01
CDC43P18898 NCP1YHR042W 2076 nt8.75□□□□□ -1.01
CDC43P18898 HSP60YLR259C 1719 nt8.74□□□□□ -1.01
CDC43P18898 YFL054CYFL054C 1941 nt8.69□□□□□ -1.02
CDC43P18898 PST2YDR032C 597 nt8.64□□□□□ -1.03
CDC43P18898 WWM1YFL010C 636 nt8.64□□□□□ -1.03
CDC43P18898 GFD2YCL036W 1701 nt8.63□□□□□ -1.03
CDC43P18898 PET9YBL030C 957 nt8.63□□□□□ -1.03
CDC43P18898 ART5YGR068C 1761 nt8.61□□□□□ -1.03
CDC43P18898 YFL021C-AYFL021C-A 855 nt8.59□□□□□ -1.03
CDC43P18898 YCH1YGR203W 447 nt8.59□□□□□ -1.03
CDC43P18898 RTS2YOR077W 699 nt8.59□□□□□ -1.03
CDC43P18898 HSL7YBR133C 2484 nt8.57□□□□□ -1.04
CDC43P18898 CUE1YMR264W 612 nt8.55□□□□□ -1.04
CDC43P18898 SWE1YJL187C 2460 nt8.54□□□□□ -1.04
CDC43P18898 YGR021WYGR021W 873 nt8.54□□□□□ -1.04
CDC43P18898 NAR1YNL240C 1476 nt8.53□□□□□ -1.04
CDC43P18898 YNL195CYNL195C 786 nt8.52□□□□□ -1.05
CDC43P18898 CSM2YIL132C 642 nt8.51□□□□□ -1.05
CDC43P18898 GLK1YCL040W 1503 nt8.5□□□□□ -1.05
CDC43P18898 RDN25-1RDN25-1 3396 nt8.48□□□□□ -1.05
CDC43P18898 RDN25-2RDN25-2 3396 nt8.48□□□□□ -1.05
CDC43P18898 HOM6YJR139C 1080 nt8.45□□□□□ -1.06
CDC43P18898 TIR4YOR009W 1464 nt8.41□□□□□ -1.06
CDC43P18898 YIL100WYIL100W 354 nt8.41□□□□□ -1.06
CDC43P18898 DSK2YMR276W 1122 nt8.4□□□□□ -1.06
CDC43P18898 PBP1YGR178C 2169 nt8.39□□□□□ -1.07
CDC43P18898 DED1YOR204W 1815 nt8.38□□□□□ -1.07
CDC43P18898 YLR236CYLR236C 324 nt8.37□□□□□ -1.07
CDC43P18898 YMR057CYMR057C 372 nt8.37□□□□□ -1.07
CDC43P18898 RPM1RPM1 483 nt8.37□□□□□ -1.07
CDC43P18898 LCB1YMR296C 1677 nt8.35□□□□□ -1.07
CDC43P18898 SHU1YHL006C 453 nt8.33□□□□□ -1.08
CDC43P18898 CYT2YKL087C 675 nt8.33□□□□□ -1.08
CDC43P18898 FUR4YBR021W 1902 nt8.33□□□□□ -1.08
CDC43P18898 RKM5YLR137W 1104 nt8.32□□□□□ -1.08
CDC43P18898 AAC1YMR056C 930 nt8.32□□□□□ -1.08
CDC43P18898 BIO5YNR056C 1686 nt8.31□□□□□ -1.08
CDC43P18898 CMP2YML057W 1815 nt8.3□□□□□ -1.08
CDC43P18898 NPL3YDR432W 1245 nt8.27□□□□□ -1.09
CDC43P18898 YAL037C-BYAL037C-B 975 nt8.27□□□□□ -1.09
CDC43P18898 PRP4YPR178W 1398 nt8.26□□□□□ -1.09
CDC43P18898 MET8YBR213W 825 nt8.26□□□□□ -1.09
CDC43P18898 YKL097CYKL097C 411 nt8.25□□□□□ -1.09
CDC43P18898 BIO4YNR057C 714 nt8.25□□□□□ -1.09
CDC43P18898 YEL076C-AYEL076C-A 651 nt8.24□□□□□ -1.09
CDC43P18898 YEL076CYEL076C 651 nt8.24□□□□□ -1.09
CDC43P18898 MNP1YGL068W 585 nt8.24□□□□□ -1.09
CDC43P18898 YLR464WYLR464W 651 nt8.24□□□□□ -1.09
CDC43P18898 DPS1YLL018C 1674 nt8.24□□□□□ -1.09
CDC43P18898 LYS4YDR234W 2082 nt8.22□□□□□ -1.09
CDC43P18898 HEL2YDR266C 1920 nt8.22□□□□□ -1.09
CDC43P18898 SNF1YDR477W 1902 nt8.22□□□□□ -1.09
CDC43P18898 PAU21YOR394W 495 nt8.2□□□□□ -1.1
CDC43P18898 PAU22YPL282C 495 nt8.2□□□□□ -1.1
CDC43P18898 YLR154C-GYLR154C-G 150 nt8.19□□□□□ -1.1
CDC43P18898 YCL048W-AYCL048W-A 240 nt8.18□□□□□ -1.1
CDC43P18898 ARO7YPR060C 771 nt8.16□□□□□ -1.1
CDC43P18898 YJL152WYJL152W 360 nt8.14□□□□□ -1.11
CDC43P18898 YAT1YAR035W 2064 nt8.12□□□□□ -1.11
CDC43P18898 FMP52YER004W 696 nt8.08□□□□□ -1.12
CDC43P18898 SFP1YLR403W 2052 nt8.06□□□□□ -1.12
CDC43P18898 NDI1YML120C 1542 nt8.06□□□□□ -1.12
CDC43P18898 CLB6YGR109C 1143 nt8.05□□□□□ -1.12
CDC43P18898 YOL037CYOL037C 354 nt8.05□□□□□ -1.12
CDC43P18898 BMT6YLR063W 1098 nt8.04□□□□□ -1.12
CDC43P18898 YKR005CYKR005C 1578 nt8.04□□□□□ -1.12
CDC43P18898 RRD1YIL153W 1182 nt8.02□□□□□ -1.13
CDC43P18898 CCA1YER168C 1641 nt8□□□□□ -1.13
CDC43P18898 SIM1YIL123W 1431 nt7.99□□□□□ -1.13
CDC43P18898 PCM1YEL058W 1674 nt7.98□□□□□ -1.13
CDC43P18898 NPP1YCR026C 2229 nt7.98□□□□□ -1.13
CDC43P18898 SNG1YGR197C 1644 nt7.97□□□□□ -1.13
CDC43P18898 IRC24YIR036C 792 nt7.95□□□□□ -1.14
CDC43P18898 YHR056W-AYHR056W-A 435 nt7.94□□□□□ -1.14
CDC43P18898 YLR281CYLR281C 468 nt7.94□□□□□ -1.14
CDC43P18898 SPT20YOL148C 1815 nt7.93□□□□□ -1.14
CDC43P18898 IDH1YNL037C 1083 nt7.92□□□□□ -1.14
CDC43P18898 WHI5YOR083W 888 nt7.92□□□□□ -1.14
CDC43P18898 MAE1YKL029C 2010 nt7.91□□□□□ -1.14
CDC43P18898 MET2YNL277W 1461 nt7.9□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms