Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TCRBV9S1A1TA0A576 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.11■■■□□ 2.25
TCRBV9S1A1TA0A576 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
TCRBV9S1A1TA0A576 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TCRBV9S1A1TA0A576 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
TCRBV9S1A1TA0A576 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
TCRBV9S1A1TA0A576 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.03■■■□□ 2.24
TCRBV9S1A1TA0A576 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
TCRBV9S1A1TA0A576 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.98■■■□□ 2.23
TCRBV9S1A1TA0A576 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.96■■■□□ 2.23
TCRBV9S1A1TA0A576 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
TCRBV9S1A1TA0A576 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
TCRBV9S1A1TA0A576 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TCRBV9S1A1TA0A576 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.93■■■□□ 2.22
TCRBV9S1A1TA0A576 AC015813.7-201ENST00000623294 581 ntBASIC28.93■■■□□ 2.22
TCRBV9S1A1TA0A576 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
TCRBV9S1A1TA0A576 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
TCRBV9S1A1TA0A576 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
TCRBV9S1A1TA0A576 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
TCRBV9S1A1TA0A576 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.89■■■□□ 2.22
TCRBV9S1A1TA0A576 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
TCRBV9S1A1TA0A576 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
TCRBV9S1A1TA0A576 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
TCRBV9S1A1TA0A576 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
TCRBV9S1A1TA0A576 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.85■■■□□ 2.21
TCRBV9S1A1TA0A576 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TCRBV9S1A1TA0A576 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TCRBV9S1A1TA0A576 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.8■■■□□ 2.2
TCRBV9S1A1TA0A576 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TCRBV9S1A1TA0A576 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TCRBV9S1A1TA0A576 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
TCRBV9S1A1TA0A576 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.78■■■□□ 2.2
TCRBV9S1A1TA0A576 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TCRBV9S1A1TA0A576 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
TCRBV9S1A1TA0A576 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TCRBV9S1A1TA0A576 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
TCRBV9S1A1TA0A576 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TCRBV9S1A1TA0A576 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TCRBV9S1A1TA0A576 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TCRBV9S1A1TA0A576 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.71■■■□□ 2.19
TCRBV9S1A1TA0A576 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.71■■■□□ 2.19
TCRBV9S1A1TA0A576 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TCRBV9S1A1TA0A576 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
TCRBV9S1A1TA0A576 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TCRBV9S1A1TA0A576 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
TCRBV9S1A1TA0A576 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TCRBV9S1A1TA0A576 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TCRBV9S1A1TA0A576 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TCRBV9S1A1TA0A576 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
TCRBV9S1A1TA0A576 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TCRBV9S1A1TA0A576 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TCRBV9S1A1TA0A576 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
TCRBV9S1A1TA0A576 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.59■■■□□ 2.17
TCRBV9S1A1TA0A576 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
TCRBV9S1A1TA0A576 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
TCRBV9S1A1TA0A576 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.53■■■□□ 2.16
TCRBV9S1A1TA0A576 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TCRBV9S1A1TA0A576 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TCRBV9S1A1TA0A576 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TCRBV9S1A1TA0A576 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
TCRBV9S1A1TA0A576 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.49■■■□□ 2.15
TCRBV9S1A1TA0A576 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TCRBV9S1A1TA0A576 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.48■■■□□ 2.15
TCRBV9S1A1TA0A576 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
TCRBV9S1A1TA0A576 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TCRBV9S1A1TA0A576 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TCRBV9S1A1TA0A576 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TCRBV9S1A1TA0A576 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.43■■■□□ 2.14
TCRBV9S1A1TA0A576 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.43■■■□□ 2.14
TCRBV9S1A1TA0A576 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
TCRBV9S1A1TA0A576 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TCRBV9S1A1TA0A576 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TCRBV9S1A1TA0A576 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
TCRBV9S1A1TA0A576 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
TCRBV9S1A1TA0A576 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TCRBV9S1A1TA0A576 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TCRBV9S1A1TA0A576 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TCRBV9S1A1TA0A576 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TCRBV9S1A1TA0A576 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.33■■■□□ 2.13
TCRBV9S1A1TA0A576 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
TCRBV9S1A1TA0A576 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TCRBV9S1A1TA0A576 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.32■■■□□ 2.12
TCRBV9S1A1TA0A576 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
TCRBV9S1A1TA0A576 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TCRBV9S1A1TA0A576 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.28■■■□□ 2.12
TCRBV9S1A1TA0A576 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.28■■■□□ 2.12
TCRBV9S1A1TA0A576 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TCRBV9S1A1TA0A576 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
TCRBV9S1A1TA0A576 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
TCRBV9S1A1TA0A576 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
TCRBV9S1A1TA0A576 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.26■■■□□ 2.11
TCRBV9S1A1TA0A576 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
TCRBV9S1A1TA0A576 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TCRBV9S1A1TA0A576 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TCRBV9S1A1TA0A576 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TCRBV9S1A1TA0A576 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
TCRBV9S1A1TA0A576 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TCRBV9S1A1TA0A576 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TCRBV9S1A1TA0A576 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
TCRBV9S1A1TA0A576 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms