Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV10A0A0B4J240 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV10A0A0B4J240 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRAV10A0A0B4J240 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV10A0A0B4J240 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV10A0A0B4J240 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.44■□□□□ 0.86
TRAV10A0A0B4J240 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV10A0A0B4J240 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRAV10A0A0B4J240 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV10A0A0B4J240 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
TRAV10A0A0B4J240 AL031258.1-201ENST00000623562 325 ntBASIC20.41■□□□□ 0.86
TRAV10A0A0B4J240 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TRAV10A0A0B4J240 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TRAV10A0A0B4J240 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAV10A0A0B4J240 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV10A0A0B4J240 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV10A0A0B4J240 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV10A0A0B4J240 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV10A0A0B4J240 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.31■□□□□ 0.84
TRAV10A0A0B4J240 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV10A0A0B4J240 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.31■□□□□ 0.84
TRAV10A0A0B4J240 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV10A0A0B4J240 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV10A0A0B4J240 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV10A0A0B4J240 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAV10A0A0B4J240 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV10A0A0B4J240 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.24■□□□□ 0.83
TRAV10A0A0B4J240 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAV10A0A0B4J240 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.23■□□□□ 0.83
TRAV10A0A0B4J240 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV10A0A0B4J240 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV10A0A0B4J240 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV10A0A0B4J240 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV10A0A0B4J240 AC145285.7-201ENST00000614819 1539 ntBASIC20.18■□□□□ 0.82
TRAV10A0A0B4J240 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV10A0A0B4J240 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV10A0A0B4J240 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TRAV10A0A0B4J240 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAV10A0A0B4J240 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.14■□□□□ 0.81
TRAV10A0A0B4J240 RARRES2P7-201ENST00000567349 469 ntBASIC20.14■□□□□ 0.81
TRAV10A0A0B4J240 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV10A0A0B4J240 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV10A0A0B4J240 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV10A0A0B4J240 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV10A0A0B4J240 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV10A0A0B4J240 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV10A0A0B4J240 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRAV10A0A0B4J240 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV10A0A0B4J240 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV10A0A0B4J240 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.02■□□□□ 0.8
TRAV10A0A0B4J240 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV10A0A0B4J240 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.01■□□□□ 0.79
TRAV10A0A0B4J240 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV10A0A0B4J240 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRAV10A0A0B4J240 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRAV10A0A0B4J240 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV10A0A0B4J240 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAV10A0A0B4J240 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV10A0A0B4J240 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRAV10A0A0B4J240 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV10A0A0B4J240 SETD8P1-201ENST00000623146 1180 ntBASIC19.94■□□□□ 0.78
TRAV10A0A0B4J240 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV10A0A0B4J240 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAV10A0A0B4J240 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV10A0A0B4J240 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV10A0A0B4J240 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV10A0A0B4J240 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV10A0A0B4J240 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV10A0A0B4J240 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV10A0A0B4J240 AC097358.2-201ENST00000607541 1159 ntBASIC19.91■□□□□ 0.78
TRAV10A0A0B4J240 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV10A0A0B4J240 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV10A0A0B4J240 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRAV10A0A0B4J240 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV10A0A0B4J240 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV10A0A0B4J240 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAV10A0A0B4J240 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV10A0A0B4J240 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAV10A0A0B4J240 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV10A0A0B4J240 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV10A0A0B4J240 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV10A0A0B4J240 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV10A0A0B4J240 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV10A0A0B4J240 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV10A0A0B4J240 AC136428.2-201ENST00000563187 214 ntBASIC19.79■□□□□ 0.76
TRAV10A0A0B4J240 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV10A0A0B4J240 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV10A0A0B4J240 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC19.77■□□□□ 0.76
TRAV10A0A0B4J240 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV10A0A0B4J240 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV10A0A0B4J240 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAV10A0A0B4J240 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAV10A0A0B4J240 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV10A0A0B4J240 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV10A0A0B4J240 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV10A0A0B4J240 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TRAV10A0A0B4J240 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRAV10A0A0B4J240 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV10A0A0B4J240 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV10A0A0B4J240 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms