Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 AL136038.3-201ENST00000561909 1096 ntBASIC15.18■□□□□ 0.02
AP4S1Q9Y587 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 AL589182.2-201ENST00000619332 1049 ntBASIC15.18■□□□□ 0.02
AP4S1Q9Y587 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 AL022326.1-202ENST00000641533 845 ntBASIC15.18■□□□□ 0.02
AP4S1Q9Y587 KRT8P44-201ENST00000441609 1350 ntBASIC15.18■□□□□ 0.02
AP4S1Q9Y587 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 AC126365.1-201ENST00000578585 1514 ntBASIC15.17■□□□□ 0.02
AP4S1Q9Y587 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 AC016734.2-201ENST00000624325 1377 ntBASIC15.17■□□□□ 0.02
AP4S1Q9Y587 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 AC005521.1-201ENST00000393351 872 ntBASIC15.17■□□□□ 0.02
AP4S1Q9Y587 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 IGHV3-47-201ENST00000425060 335 ntBASIC15.17■□□□□ 0.02
AP4S1Q9Y587 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 AC126335.2-201ENST00000623362 4637 ntBASIC15.17■□□□□ 0.02
AP4S1Q9Y587 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 KRT18P1-202ENST00000452408 1331 ntBASIC15.17■□□□□ 0.02
AP4S1Q9Y587 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP4S1Q9Y587 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 AC063952.2-201ENST00000498792 1227 ntBASIC15.16■□□□□ 0.02
AP4S1Q9Y587 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 AP005117.1-201ENST00000584346 1413 ntBASIC15.16■□□□□ 0.02
AP4S1Q9Y587 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4S1Q9Y587 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms