Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 AL390955.2-201ENST00000603032 514 ntBASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 AL358472.5-202ENST00000641448 1267 ntBASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.51■□□□□ 0.07
CUEDC1Q9NWM3 AP003680.1-201ENST00000598970 3660 ntBASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 AC112504.1-201ENST00000623415 1841 ntBASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 CYP4F24P-201ENST00000586049 1580 ntBASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 TUBB3P1-201ENST00000405796 1332 ntBASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 AC002472.2-201ENST00000442739 958 ntBASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 AL359881.2-201ENST00000602973 570 ntBASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 RN7SL828P-201ENST00000607615 303 ntBASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CUEDC1Q9NWM3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 AP001282.1-201ENST00000531301 1499 ntBASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 AC236430.1-201ENST00000402231 743 ntBASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 AC026979.3-201ENST00000607315 403 ntBASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 AL133215.2-201ENST00000609242 977 ntBASIC15.49■□□□□ 0.07
CUEDC1Q9NWM3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms