Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 AC254562.1-201ENST00000417586 456 ntBASIC15.98■□□□□ 0.15
MRM3Q9HC36 AC136604.1-201ENST00000418535 575 ntBASIC15.98■□□□□ 0.15
MRM3Q9HC36 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 DNAJB3-202ENST00000449667 1266 ntBASIC15.98■□□□□ 0.15
MRM3Q9HC36 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 AC105021.1-202ENST00000570572 669 ntBASIC15.98■□□□□ 0.15
MRM3Q9HC36 AC004835.2-201ENST00000603762 682 ntBASIC15.98■□□□□ 0.15
MRM3Q9HC36 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
MRM3Q9HC36 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRM3Q9HC36 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 SNHG9-202ENST00000564014 471 ntBASIC15.97■□□□□ 0.15
MRM3Q9HC36 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 AC009093.7-201ENST00000623853 1223 ntBASIC15.97■□□□□ 0.15
MRM3Q9HC36 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
MRM3Q9HC36 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRM3Q9HC36 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
MRM3Q9HC36 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
MRM3Q9HC36 AL513477.1-201ENST00000602865 2407 ntBASIC15.96■□□□□ 0.15
MRM3Q9HC36 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MRM3Q9HC36 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
MRM3Q9HC36 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
MRM3Q9HC36 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.96■□□□□ 0.15
MRM3Q9HC36 SPDYE14P-201ENST00000442619 822 ntBASIC15.96■□□□□ 0.15
MRM3Q9HC36 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.96■□□□□ 0.15
MRM3Q9HC36 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.96■□□□□ 0.15
MRM3Q9HC36 AC007967.4-201ENST00000614700 386 ntBASIC15.96■□□□□ 0.15
MRM3Q9HC36 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.96■□□□□ 0.15
MRM3Q9HC36 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRM3Q9HC36 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms