Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 AC243960.2-201ENST00000600996 747 ntBASIC18.62■□□□□ 0.57
EFCC1Q9HA90 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 RHOQP1-201ENST00000555758 579 ntBASIC18.61■□□□□ 0.57
EFCC1Q9HA90 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCC1Q9HA90 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.6■□□□□ 0.57
EFCC1Q9HA90 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 AC005229.1-201ENST00000392885 409 ntBASIC18.6■□□□□ 0.57
EFCC1Q9HA90 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 MIR1247-201ENST00000408206 136 ntBASIC18.6■□□□□ 0.57
EFCC1Q9HA90 GPAA1P2-201ENST00000417923 928 ntBASIC18.6■□□□□ 0.57
EFCC1Q9HA90 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCC1Q9HA90 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 AL139010.1-201ENST00000454878 894 ntBASIC18.59■□□□□ 0.57
EFCC1Q9HA90 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFCC1Q9HA90 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms