Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 AC013268.4-201ENST00000637413 2228 ntBASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CMSS1Q9BQ75 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 SBF1P1-201ENST00000444527 5631 ntBASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 RNU1-129P-201ENST00000384064 167 ntBASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 U1.21-201ENST00000580816 167 ntBASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 AL356488.2-201ENST00000602755 427 ntBASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 AL031055.1-201ENST00000606362 631 ntBASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 AC005593.1-201ENST00000624894 515 ntBASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMSS1Q9BQ75 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 HAUS4P1-201ENST00000406739 1145 ntBASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 PMS2P4-201ENST00000412466 1052 ntBASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 AC105339.3-201ENST00000560043 636 ntBASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 AC008735.5-201ENST00000623544 497 ntBASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms