Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
NPAS2Q99743 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS2Q99743 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.72■□□□□ 0.11
NPAS2Q99743 MKNK2P1-201ENST00000437526 628 ntBASIC15.72■□□□□ 0.11
NPAS2Q99743 AP006288.1-201ENST00000446065 395 ntBASIC15.72■□□□□ 0.11
NPAS2Q99743 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.72■□□□□ 0.11
NPAS2Q99743 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS2Q99743 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
NPAS2Q99743 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.72■□□□□ 0.11
NPAS2Q99743 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS2Q99743 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.72■□□□□ 0.11
NPAS2Q99743 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NPAS2Q99743 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NPAS2Q99743 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS2Q99743 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS2Q99743 AL353732.1-201ENST00000569618 1459 ntBASIC15.71■□□□□ 0.11
NPAS2Q99743 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.71■□□□□ 0.11
NPAS2Q99743 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 AC129492.6-201ENST00000611383 1305 ntBASIC15.71■□□□□ 0.11
NPAS2Q99743 CICP13-201ENST00000422015 2789 ntBASIC15.71■□□□□ 0.11
NPAS2Q99743 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 FLJ16779-201ENST00000612722 7638 ntBASIC15.71■□□□□ 0.11
NPAS2Q99743 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
NPAS2Q99743 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.71■□□□□ 0.11
NPAS2Q99743 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS2Q99743 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.71■□□□□ 0.11
NPAS2Q99743 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.71■□□□□ 0.11
NPAS2Q99743 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.71■□□□□ 0.11
NPAS2Q99743 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS2Q99743 AL513480.1-201ENST00000451731 511 ntBASIC15.71■□□□□ 0.11
NPAS2Q99743 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS2Q99743 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS2Q99743 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS2Q99743 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPAS2Q99743 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
NPAS2Q99743 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS2Q99743 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
NPAS2Q99743 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.71■□□□□ 0.11
NPAS2Q99743 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS2Q99743 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPAS2Q99743 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPAS2Q99743 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPAS2Q99743 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS2Q99743 AL109954.1-202ENST00000564051 2148 ntBASIC15.71■□□□□ 0.11
NPAS2Q99743 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NPAS2Q99743 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.71■□□□□ 0.1
NPAS2Q99743 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS2Q99743 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
NPAS2Q99743 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS2Q99743 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS2Q99743 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS2Q99743 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS2Q99743 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
NPAS2Q99743 ELL2P1-201ENST00000413990 1906 ntBASIC15.7■□□□□ 0.1
NPAS2Q99743 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPAS2Q99743 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
NPAS2Q99743 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS2Q99743 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS2Q99743 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
NPAS2Q99743 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS2Q99743 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
NPAS2Q99743 FAM58CP-201ENST00000435741 640 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms