Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AP000769.1-203ENST00000637245 208 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 PUDPP3-201ENST00000445368 636 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 MIR4254-201ENST00000581063 76 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 MIR6741-201ENST00000618782 63 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 MIR1301-201ENST00000408518 82 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 OR52X1P-201ENST00000446117 914 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 TPT1P6-201ENST00000458298 514 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 MIR4472-1-201ENST00000584349 80 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC006116.2-201ENST00000589958 988 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC009955.4-201ENST00000597192 544 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC010335.3-201ENST00000623767 531 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AP001184.1-201ENST00000637936 376 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC106785.2-201ENST00000564385 1319 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 HMGA1P2-201ENST00000430198 324 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AL354861.1-201ENST00000445213 355 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 DPY19L2P5-201ENST00000456300 331 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 PRMT1P1-201ENST00000604252 1009 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms