Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 AC006449.6-201ENST00000612330 2296 ntBASIC12.17□□□□□ -0.46
AP1S3Q96PC3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SPDYE21P-201ENST00000413323 827 ntBASIC12.17□□□□□ -0.46
AP1S3Q96PC3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 AC063952.2-201ENST00000498792 1227 ntBASIC12.17□□□□□ -0.46
AP1S3Q96PC3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 Z69720.1-201ENST00000601483 472 ntBASIC12.17□□□□□ -0.46
AP1S3Q96PC3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.17□□□□□ -0.46
AP1S3Q96PC3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.17□□□□□ -0.46
AP1S3Q96PC3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 AC007614.5-201ENST00000623424 8892 ntBASIC12.17□□□□□ -0.46
AP1S3Q96PC3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 AC073347.1-201ENST00000421633 2643 ntBASIC12.17□□□□□ -0.46
AP1S3Q96PC3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 GGT4P-201ENST00000623672 1708 ntBASIC12.17□□□□□ -0.46
AP1S3Q96PC3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 AC243591.1-201ENST00000452967 1364 ntBASIC12.17□□□□□ -0.46
AP1S3Q96PC3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP1S3Q96PC3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 PRAL-201ENST00000624952 3286 ntBASIC12.16□□□□□ -0.46
AP1S3Q96PC3 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
AP1S3Q96PC3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms