Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 AC134915.1-201ENST00000426461 574 ntBASIC18.51■□□□□ 0.55
CCDC17Q96LX7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 AL121723.1-201ENST00000445194 1519 ntBASIC18.5■□□□□ 0.55
CCDC17Q96LX7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 AL133267.1-201ENST00000398220 340 ntBASIC18.5■□□□□ 0.55
CCDC17Q96LX7 AC079776.1-201ENST00000401540 1152 ntBASIC18.5■□□□□ 0.55
CCDC17Q96LX7 ATP5G2P4-201ENST00000442175 420 ntBASIC18.5■□□□□ 0.55
CCDC17Q96LX7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 ENPP7P5-201ENST00000541031 1031 ntBASIC18.5■□□□□ 0.55
CCDC17Q96LX7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 MIR4313-201ENST00000580760 101 ntBASIC18.5■□□□□ 0.55
CCDC17Q96LX7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.5■□□□□ 0.55
CCDC17Q96LX7 AL662844.4-201ENST00000606367 2838 ntBASIC18.5■□□□□ 0.55
CCDC17Q96LX7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC17Q96LX7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 KRT17P8-201ENST00000540749 863 ntBASIC18.49■□□□□ 0.55
CCDC17Q96LX7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 AL359711.2-201ENST00000563105 872 ntBASIC18.49■□□□□ 0.55
CCDC17Q96LX7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 AC010319.3-201ENST00000597028 470 ntBASIC18.49■□□□□ 0.55
CCDC17Q96LX7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 AC006449.5-201ENST00000610658 2098 ntBASIC18.49■□□□□ 0.55
CCDC17Q96LX7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 INTS4P2-202ENST00000614726 2019 ntBASIC18.49■□□□□ 0.55
CCDC17Q96LX7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC17Q96LX7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms