Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 AL031284.1-201ENST00000419297 478 ntBASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 RHOQP3-201ENST00000437982 621 ntBASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 KRT18P2-201ENST00000447938 1258 ntBASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 AC002347.1-201ENST00000569543 541 ntBASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 MIR4313-201ENST00000580760 101 ntBASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 FOXO1B-201ENST00000504678 1527 ntBASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 SLC25A6P4-201ENST00000586535 553 ntBASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHAMP1Q96JM3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 MIR574-201ENST00000385209 96 ntBASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 AC244107.1-201ENST00000442033 332 ntBASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 AC109635.5-201ENST00000533593 962 ntBASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 MIR4321-201ENST00000592276 80 ntBASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 AC025580.3-201ENST00000617932 1424 ntBASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms