Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 AC004870.1-201ENST00000315132 882 ntBASIC15.29■□□□□ 0.04
ITCHQ96J02 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ITCHQ96J02 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.29■□□□□ 0.04
ITCHQ96J02 PRYP6-201ENST00000514804 343 ntBASIC15.29■□□□□ 0.04
ITCHQ96J02 RNA5SP415-201ENST00000517246 115 ntBASIC15.29■□□□□ 0.04
ITCHQ96J02 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.29■□□□□ 0.04
ITCHQ96J02 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
ITCHQ96J02 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.29■□□□□ 0.04
ITCHQ96J02 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ITCHQ96J02 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.29■□□□□ 0.04
ITCHQ96J02 AL691432.3-201ENST00000621860 400 ntBASIC15.29■□□□□ 0.04
ITCHQ96J02 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.29■□□□□ 0.04
ITCHQ96J02 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.29■□□□□ 0.04
ITCHQ96J02 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.29■□□□□ 0.04
ITCHQ96J02 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.28■□□□□ 0.04
ITCHQ96J02 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
ITCHQ96J02 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.28■□□□□ 0.04
ITCHQ96J02 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.28■□□□□ 0.04
ITCHQ96J02 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ITCHQ96J02 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 AL109954.1-202ENST00000564051 2148 ntBASIC15.28■□□□□ 0.04
ITCHQ96J02 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
ITCHQ96J02 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ITCHQ96J02 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ITCHQ96J02 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.28■□□□□ 0.04
ITCHQ96J02 FAAHP1-202ENST00000446499 1238 ntBASIC15.28■□□□□ 0.04
ITCHQ96J02 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.28■□□□□ 0.04
ITCHQ96J02 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.28■□□□□ 0.04
ITCHQ96J02 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.28■□□□□ 0.04
ITCHQ96J02 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.28■□□□□ 0.04
ITCHQ96J02 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.28■□□□□ 0.04
ITCHQ96J02 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.28■□□□□ 0.04
ITCHQ96J02 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ITCHQ96J02 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.28■□□□□ 0.04
ITCHQ96J02 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.28■□□□□ 0.04
ITCHQ96J02 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
ITCHQ96J02 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.28■□□□□ 0.04
ITCHQ96J02 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ITCHQ96J02 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ITCHQ96J02 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.27■□□□□ 0.04
ITCHQ96J02 AC134407.2-201ENST00000625089 1978 ntBASIC15.27■□□□□ 0.04
ITCHQ96J02 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.27■□□□□ 0.04
ITCHQ96J02 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
ITCHQ96J02 WASH6P-202ENST00000359512 1437 ntBASIC15.27■□□□□ 0.04
ITCHQ96J02 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
ITCHQ96J02 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ITCHQ96J02 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.27■□□□□ 0.04
ITCHQ96J02 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ITCHQ96J02 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ITCHQ96J02 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ITCHQ96J02 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ITCHQ96J02 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.27■□□□□ 0.04
ITCHQ96J02 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.27■□□□□ 0.04
ITCHQ96J02 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ITCHQ96J02 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ITCHQ96J02 GPX1P2-201ENST00000429271 606 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms