Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKAP2Q8WWK9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CKAP2Q8WWK9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CKAP2Q8WWK9 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CKAP2Q8WWK9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.93■□□□□ 0.14
CKAP2Q8WWK9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.93■□□□□ 0.14
CKAP2Q8WWK9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 ZBED1P1-201ENST00000502364 1930 ntBASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 AC127383.1-201ENST00000444697 1800 ntBASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 RNU1-129P-201ENST00000384064 167 ntBASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 AP000867.3-201ENST00000524675 377 ntBASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 AC012615.1-201ENST00000565797 1299 ntBASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 U1.21-201ENST00000580816 167 ntBASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 GGTLC5P-201ENST00000617623 998 ntBASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.92■□□□□ 0.14
CKAP2Q8WWK9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 RBM17P3-201ENST00000417687 1192 ntBASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 MIR3180-1-201ENST00000580374 94 ntBASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 MIR3180-3-201ENST00000584616 94 ntBASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CKAP2Q8WWK9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms