Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AL450487.1-201ENST00000426799 995 ntBASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 MTDHP4-201ENST00000600287 670 ntBASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 AC012569.1-201ENST00000591191 1524 ntBASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB3IL1Q8TBN0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 AC006504.4-201ENST00000592118 1568 ntBASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 ELK2BP-201ENST00000415014 1224 ntBASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 AC006557.2-201ENST00000592985 1240 ntBASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RAB3IL1Q8TBN0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 AC105250.1-201ENST00000509378 2057 ntBASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB3IL1Q8TBN0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB3IL1Q8TBN0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms