Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 AL607033.1-201ENST00000623900 1599 ntBASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 AC074338.1-201ENST00000416825 156 ntBASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 Z97205.2-201ENST00000564697 1639 ntBASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC4Q8N9L1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 MIR770-201ENST00000390219 98 ntBASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 BASP1P1-201ENST00000430708 665 ntBASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 AC093214.1-201ENST00000511688 1107 ntBASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 AC044860.1-202ENST00000559481 777 ntBASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZIC4Q8N9L1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
ZIC4Q8N9L1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.08□□□□□ -0.15
ZIC4Q8N9L1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms