Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 FAM207CP-201ENST00000443486 507 ntBASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 UGT1A2P-201ENST00000454886 866 ntBASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 ALG1L8P-201ENST00000533887 760 ntBASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 AC027307.2-201ENST00000591252 911 ntBASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 LINC02560-201ENST00000596379 459 ntBASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.04■□□□□ 0.16
FBXO39Q8N4B4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 AC008761.3-201ENST00000624803 892 ntBASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 AP005117.1-202ENST00000581724 1908 ntBASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FBXO39Q8N4B4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.02■□□□□ 0.16
FBXO39Q8N4B4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms