Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 KRT18P13-201ENST00000400056 1290 ntBASIC15□□□□□ -0.01
DEPDC4Q8N2C3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 KRT18P3-201ENST00000451602 1288 ntBASIC15□□□□□ -0.01
DEPDC4Q8N2C3 AC108751.1-201ENST00000490852 363 ntBASIC15□□□□□ -0.01
DEPDC4Q8N2C3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 PPP1R26P4-201ENST00000619065 3527 ntBASIC15□□□□□ -0.01
DEPDC4Q8N2C3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15□□□□□ -0.01
DEPDC4Q8N2C3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 AL592424.1-201ENST00000563624 1536 ntBASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 CRYGEP-201ENST00000412192 528 ntBASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 AC092865.5-201ENST00000545435 363 ntBASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 CYP2A7P1-201ENST00000595391 815 ntBASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 GGTLC5P-201ENST00000617623 998 ntBASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 AC005786.4-201ENST00000623369 682 ntBASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
DEPDC4Q8N2C3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 AL009178.2-201ENST00000597278 2719 ntBASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
DEPDC4Q8N2C3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms