Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 KRT8P12-202ENST00000472924 1397 ntBASIC17.38■□□□□ 0.37
VPS52Q8N1B4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.37■□□□□ 0.37
VPS52Q8N1B4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 GPR53P-205ENST00000457298 1084 ntBASIC17.37■□□□□ 0.37
VPS52Q8N1B4 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 AC008494.3-201ENST00000606615 944 ntBASIC17.37■□□□□ 0.37
VPS52Q8N1B4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 GPAA1P2-202ENST00000606848 1787 ntBASIC17.37■□□□□ 0.37
VPS52Q8N1B4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS52Q8N1B4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 HLA-A-202ENST00000376806 1854 ntBASIC17.36■□□□□ 0.37
VPS52Q8N1B4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 AC114501.2-201ENST00000439631 535 ntBASIC17.36■□□□□ 0.37
VPS52Q8N1B4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 IGHV3-72-202ENST00000621503 303 ntBASIC17.36■□□□□ 0.37
VPS52Q8N1B4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.36■□□□□ 0.37
VPS52Q8N1B4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 AL031731.1-201ENST00000642131 2094 ntBASIC17.36■□□□□ 0.37
VPS52Q8N1B4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms