Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 WASH6P-202ENST00000359512 1437 ntBASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 AC099522.2-201ENST00000607001 744 ntBASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 U82695.1-201ENST00000635752 1889 ntBASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC44A2Q8IWA5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 AL592424.1-201ENST00000563624 1536 ntBASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 YBX2P1-201ENST00000394192 760 ntBASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 C20orf181-201ENST00000623918 480 ntBASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC44A2Q8IWA5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms