Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 TERC-201ENST00000602385 541 ntBASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 AL020989.1-201ENST00000422979 469 ntBASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 AC246785.2-201ENST00000432512 513 ntBASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD2Q8IV50 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.08□□□□□ -0.15
LYSMD2Q8IV50 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LYSMD2Q8IV50 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LYSMD2Q8IV50 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LYSMD2Q8IV50 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LYSMD2Q8IV50 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.15
LYSMD2Q8IV50 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
LYSMD2Q8IV50 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 OR2I1P-209ENST00000641730 5365 ntBASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 TERF1P1-201ENST00000311003 1181 ntBASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms