Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDZRN4Q6ZMN7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDZRN4Q6ZMN7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.52■□□□□ 0.56
PDZRN4Q6ZMN7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDZRN4Q6ZMN7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PDZRN4Q6ZMN7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDZRN4Q6ZMN7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDZRN4Q6ZMN7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDZRN4Q6ZMN7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDZRN4Q6ZMN7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDZRN4Q6ZMN7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDZRN4Q6ZMN7 AL109954.1-202ENST00000564051 2148 ntBASIC18.52■□□□□ 0.55
PDZRN4Q6ZMN7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.52■□□□□ 0.55
PDZRN4Q6ZMN7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 MCCD1P2-201ENST00000423228 335 ntBASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 HLA-J-202ENST00000469281 1241 ntBASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 AC092183.1-201ENST00000469884 875 ntBASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.51■□□□□ 0.55
PDZRN4Q6ZMN7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 AL161772.1-201ENST00000610494 4412 ntBASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDZRN4Q6ZMN7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.49■□□□□ 0.55
PDZRN4Q6ZMN7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms