Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 BANF1P1-201ENST00000553684 263 ntBASIC16.82■□□□□ 0.28
RNF43Q68DV7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 MIR4453-201ENST00000584019 89 ntBASIC16.82■□□□□ 0.28
RNF43Q68DV7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF43Q68DV7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF43Q68DV7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 AL596087.1-201ENST00000400979 1969 ntBASIC16.81■□□□□ 0.28
RNF43Q68DV7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 AC069120.2-201ENST00000524091 540 ntBASIC16.81■□□□□ 0.28
RNF43Q68DV7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 AC025048.6-201ENST00000634326 1161 ntBASIC16.81■□□□□ 0.28
RNF43Q68DV7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 AC006058.4-201ENST00000624016 1670 ntBASIC16.81■□□□□ 0.28
RNF43Q68DV7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF43Q68DV7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RNF43Q68DV7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 AC092580.3-201ENST00000430932 139 ntBASIC16.8■□□□□ 0.28
RNF43Q68DV7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 AC061975.2-201ENST00000581722 295 ntBASIC16.8■□□□□ 0.28
RNF43Q68DV7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.8■□□□□ 0.28
RNF43Q68DV7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF43Q68DV7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF43Q68DV7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RNF43Q68DV7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF43Q68DV7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF43Q68DV7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms