Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 PCDHA14-201ENST00000506751 2298 ntBASIC16.88■□□□□ 0.29
VARS2Q5ST30 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 AC136604.1-201ENST00000418535 575 ntBASIC16.88■□□□□ 0.29
VARS2Q5ST30 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 AC022079.1-201ENST00000621546 602 ntBASIC16.88■□□□□ 0.29
VARS2Q5ST30 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 AC092364.2-201ENST00000596710 2692 ntBASIC16.88■□□□□ 0.29
VARS2Q5ST30 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 MIR648-201ENST00000385046 94 ntBASIC16.87■□□□□ 0.29
VARS2Q5ST30 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 TTTY23B-201ENST00000442790 549 ntBASIC16.87■□□□□ 0.29
VARS2Q5ST30 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
VARS2Q5ST30 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VARS2Q5ST30 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.86■□□□□ 0.29
VARS2Q5ST30 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 TOMM22P5-201ENST00000416399 439 ntBASIC16.86■□□□□ 0.29
VARS2Q5ST30 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARS2Q5ST30 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms