Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
ATP6AP1LQ52LC2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 GPX1P2-201ENST00000429271 606 ntBASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 KRT19P2-202ENST00000557173 1012 ntBASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.5■□□□□ 0.07
ATP6AP1LQ52LC2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATP6AP1LQ52LC2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATP6AP1LQ52LC2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATP6AP1LQ52LC2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATP6AP1LQ52LC2 AC006486.2-201ENST00000624246 2199 ntBASIC15.49■□□□□ 0.07
ATP6AP1LQ52LC2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATP6AP1LQ52LC2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATP6AP1LQ52LC2 AL109954.1-202ENST00000564051 2148 ntBASIC15.49■□□□□ 0.07
ATP6AP1LQ52LC2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms