Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CD47Q08722 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 AC090616.6-203ENST00000579186 1945 ntBASIC14.92□□□□□ -0.02
CD47Q08722 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CD47Q08722 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.92□□□□□ -0.02
CD47Q08722 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.92□□□□□ -0.02
CD47Q08722 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.92□□□□□ -0.02
CD47Q08722 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.92□□□□□ -0.02
CD47Q08722 KRT126P-201ENST00000549467 1181 ntBASIC14.92□□□□□ -0.02
CD47Q08722 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.92□□□□□ -0.02
CD47Q08722 AC005412.3-201ENST00000580309 715 ntBASIC14.92□□□□□ -0.02
CD47Q08722 AP001350.2-201ENST00000625104 1094 ntBASIC14.92□□□□□ -0.02
CD47Q08722 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD47Q08722 LINC00552-201ENST00000625151 2579 ntBASIC14.92□□□□□ -0.02
CD47Q08722 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.92□□□□□ -0.02
CD47Q08722 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.92□□□□□ -0.02
CD47Q08722 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.92□□□□□ -0.02
CD47Q08722 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD47Q08722 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CD47Q08722 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CD47Q08722 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CD47Q08722 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.91□□□□□ -0.02
CD47Q08722 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 SLC22A20-204ENST00000530038 1673 ntBASIC14.91□□□□□ -0.02
CD47Q08722 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CD47Q08722 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.91□□□□□ -0.02
CD47Q08722 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.91□□□□□ -0.02
CD47Q08722 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 PMS2P1-201ENST00000431037 1228 ntBASIC14.91□□□□□ -0.02
CD47Q08722 AC108073.2-201ENST00000464002 357 ntBASIC14.91□□□□□ -0.02
CD47Q08722 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.91□□□□□ -0.02
CD47Q08722 AC093909.1-201ENST00000504731 1122 ntBASIC14.91□□□□□ -0.02
CD47Q08722 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 AP002469.2-201ENST00000531724 424 ntBASIC14.91□□□□□ -0.02
CD47Q08722 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.91□□□□□ -0.02
CD47Q08722 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.91□□□□□ -0.02
CD47Q08722 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 MIR4751-201ENST00000578027 74 ntBASIC14.91□□□□□ -0.02
CD47Q08722 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.91□□□□□ -0.02
CD47Q08722 AC117500.6-201ENST00000624871 588 ntBASIC14.91□□□□□ -0.02
CD47Q08722 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.91□□□□□ -0.02
CD47Q08722 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD47Q08722 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.91□□□□□ -0.02
CD47Q08722 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 AC007326.2-201ENST00000624224 7579 ntBASIC14.9□□□□□ -0.02
CD47Q08722 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CD47Q08722 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.9□□□□□ -0.02
CD47Q08722 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.9□□□□□ -0.02
CD47Q08722 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.9□□□□□ -0.02
CD47Q08722 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD47Q08722 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms