Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
YBX1P67809 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.59■□□□□ 0.09
YBX1P67809 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
YBX1P67809 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.59■□□□□ 0.09
YBX1P67809 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.59■□□□□ 0.09
YBX1P67809 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.59■□□□□ 0.09
YBX1P67809 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
YBX1P67809 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.59■□□□□ 0.09
YBX1P67809 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.59■□□□□ 0.09
YBX1P67809 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.59■□□□□ 0.09
YBX1P67809 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.59■□□□□ 0.09
YBX1P67809 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.59■□□□□ 0.09
YBX1P67809 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 DUX4L27-201ENST00000554796 1261 ntBASIC15.59■□□□□ 0.09
YBX1P67809 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.59■□□□□ 0.09
YBX1P67809 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.59■□□□□ 0.09
YBX1P67809 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.59■□□□□ 0.09
YBX1P67809 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.59■□□□□ 0.09
YBX1P67809 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
YBX1P67809 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YBX1P67809 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
YBX1P67809 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.58■□□□□ 0.09
YBX1P67809 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
YBX1P67809 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
YBX1P67809 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.58■□□□□ 0.08
YBX1P67809 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.58■□□□□ 0.08
YBX1P67809 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
YBX1P67809 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
YBX1P67809 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
YBX1P67809 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.58■□□□□ 0.08
YBX1P67809 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.58■□□□□ 0.08
YBX1P67809 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.58■□□□□ 0.08
YBX1P67809 AC025678.2-201ENST00000562061 970 ntBASIC15.58■□□□□ 0.08
YBX1P67809 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.58■□□□□ 0.08
YBX1P67809 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.58■□□□□ 0.08
YBX1P67809 AL365330.1-201ENST00000607459 531 ntBASIC15.58■□□□□ 0.08
YBX1P67809 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.58■□□□□ 0.08
YBX1P67809 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.58■□□□□ 0.08
YBX1P67809 TUBB3P1-201ENST00000405796 1332 ntBASIC15.58■□□□□ 0.08
YBX1P67809 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
YBX1P67809 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 AC134407.2-201ENST00000625089 1978 ntBASIC15.58■□□□□ 0.08
YBX1P67809 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
YBX1P67809 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.57■□□□□ 0.08
YBX1P67809 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.57■□□□□ 0.08
YBX1P67809 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.57■□□□□ 0.08
YBX1P67809 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
YBX1P67809 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
YBX1P67809 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.57■□□□□ 0.08
YBX1P67809 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
YBX1P67809 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.57■□□□□ 0.08
YBX1P67809 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.57■□□□□ 0.08
YBX1P67809 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.57■□□□□ 0.08
YBX1P67809 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
YBX1P67809 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.57■□□□□ 0.08
YBX1P67809 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.57■□□□□ 0.08
YBX1P67809 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms