Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.82□□□□□ -0.2
ACTBP60709 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
ACTBP60709 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ACTBP60709 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.82□□□□□ -0.2
ACTBP60709 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.82□□□□□ -0.2
ACTBP60709 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.82□□□□□ -0.2
ACTBP60709 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
ACTBP60709 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.82□□□□□ -0.2
ACTBP60709 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.82□□□□□ -0.2
ACTBP60709 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ACTBP60709 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.82□□□□□ -0.2
ACTBP60709 UNC93B7-201ENST00000509439 705 ntBASIC13.82□□□□□ -0.2
ACTBP60709 AF238378.1-201ENST00000526806 358 ntBASIC13.82□□□□□ -0.2
ACTBP60709 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.82□□□□□ -0.2
ACTBP60709 SART3-203ENST00000546611 1184 ntBASIC13.82□□□□□ -0.2
ACTBP60709 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.82□□□□□ -0.2
ACTBP60709 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.82□□□□□ -0.2
ACTBP60709 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ACTBP60709 AC005412.3-201ENST00000580309 715 ntBASIC13.82□□□□□ -0.2
ACTBP60709 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.82□□□□□ -0.2
ACTBP60709 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ACTBP60709 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ACTBP60709 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.82□□□□□ -0.2
ACTBP60709 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
ACTBP60709 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.82□□□□□ -0.2
ACTBP60709 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ACTBP60709 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ACTBP60709 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.82□□□□□ -0.2
ACTBP60709 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ACTBP60709 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ACTBP60709 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.81□□□□□ -0.2
ACTBP60709 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.81□□□□□ -0.2
ACTBP60709 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ACTBP60709 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ACTBP60709 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.81□□□□□ -0.2
ACTBP60709 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.81□□□□□ -0.2
ACTBP60709 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ACTBP60709 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.81□□□□□ -0.2
ACTBP60709 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.81□□□□□ -0.2
ACTBP60709 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
ACTBP60709 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.81□□□□□ -0.2
ACTBP60709 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ACTBP60709 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.81□□□□□ -0.2
ACTBP60709 AL160237.2-201ENST00000556165 472 ntBASIC13.81□□□□□ -0.2
ACTBP60709 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.81□□□□□ -0.2
ACTBP60709 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.81□□□□□ -0.2
ACTBP60709 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.81□□□□□ -0.2
ACTBP60709 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.81□□□□□ -0.2
ACTBP60709 AC026748.1-201ENST00000624349 3251 ntBASIC13.81□□□□□ -0.2
ACTBP60709 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.81□□□□□ -0.2
ACTBP60709 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
ACTBP60709 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
ACTBP60709 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.81□□□□□ -0.2
ACTBP60709 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
ACTBP60709 GRK6P1-201ENST00000400595 1711 ntBASIC13.81□□□□□ -0.2
ACTBP60709 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.81□□□□□ -0.2
ACTBP60709 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ACTBP60709 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ACTBP60709 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ACTBP60709 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ACTBP60709 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
ACTBP60709 AC023908.3-201ENST00000564211 3047 ntBASIC13.8□□□□□ -0.2
ACTBP60709 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms