Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 AL358472.5-202ENST00000641448 1267 ntBASIC18.33■□□□□ 0.52
CHMP4BP1P59074 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 FAM220BP-201ENST00000377689 816 ntBASIC18.32■□□□□ 0.52
CHMP4BP1P59074 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 AL596325.1-201ENST00000563991 1082 ntBASIC18.32■□□□□ 0.52
CHMP4BP1P59074 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 AC005052.1-201ENST00000625181 2492 ntBASIC18.32■□□□□ 0.52
CHMP4BP1P59074 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP4BP1P59074 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 GNAQP1-201ENST00000444815 1067 ntBASIC18.31■□□□□ 0.52
CHMP4BP1P59074 SPTLC1P1-201ENST00000447199 261 ntBASIC18.31■□□□□ 0.52
CHMP4BP1P59074 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 AC009407.1-201ENST00000568958 598 ntBASIC18.31■□□□□ 0.52
CHMP4BP1P59074 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 AL008721.1-201ENST00000609964 604 ntBASIC18.31■□□□□ 0.52
CHMP4BP1P59074 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP4BP1P59074 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms