Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.44■□□□□ 0.38
NCKAP1LP55160 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKAP1LP55160 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKAP1LP55160 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKAP1LP55160 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKAP1LP55160 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKAP1LP55160 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKAP1LP55160 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKAP1LP55160 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKAP1LP55160 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
NCKAP1LP55160 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.43■□□□□ 0.38
NCKAP1LP55160 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 LINC01115-203ENST00000606068 577 ntBASIC17.43■□□□□ 0.38
NCKAP1LP55160 AC004461.2-201ENST00000629517 803 ntBASIC17.43■□□□□ 0.38
NCKAP1LP55160 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKAP1LP55160 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKAP1LP55160 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 SPDYE18-201ENST00000510091 1050 ntBASIC17.42■□□□□ 0.38
NCKAP1LP55160 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 AC092337.1-201ENST00000568699 1129 ntBASIC17.42■□□□□ 0.38
NCKAP1LP55160 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.42■□□□□ 0.38
NCKAP1LP55160 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKAP1LP55160 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms