Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN5P54829 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN5P54829 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN5P54829 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN5P54829 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTPN5P54829 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN5P54829 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PTPN5P54829 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN5P54829 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN5P54829 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN5P54829 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.5■□□□□ 0.23
PTPN5P54829 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PTPN5P54829 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN5P54829 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN5P54829 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PTPN5P54829 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN5P54829 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN5P54829 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.5■□□□□ 0.23
PTPN5P54829 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN5P54829 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.5■□□□□ 0.23
PTPN5P54829 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN5P54829 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN5P54829 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN5P54829 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PTPN5P54829 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PTPN5P54829 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PTPN5P54829 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN5P54829 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN5P54829 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.5■□□□□ 0.23
PTPN5P54829 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTPN5P54829 CLK3P2-201ENST00000427566 1453 ntBASIC16.49■□□□□ 0.23
PTPN5P54829 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN5P54829 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN5P54829 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN5P54829 AL603841.1-201ENST00000430516 664 ntBASIC16.49■□□□□ 0.23
PTPN5P54829 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN5P54829 RNA5SP410-201ENST00000516285 106 ntBASIC16.49■□□□□ 0.23
PTPN5P54829 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN5P54829 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
PTPN5P54829 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN5P54829 AL033527.5-202ENST00000641632 1098 ntBASIC16.49■□□□□ 0.23
PTPN5P54829 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTPN5P54829 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN5P54829 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN5P54829 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
PTPN5P54829 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN5P54829 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PTPN5P54829 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN5P54829 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN5P54829 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN5P54829 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PTPN5P54829 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN5P54829 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN5P54829 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
PTPN5P54829 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PTPN5P54829 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 BTBD6P1-201ENST00000412176 1267 ntBASIC16.48■□□□□ 0.23
PTPN5P54829 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC16.48■□□□□ 0.23
PTPN5P54829 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN5P54829 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN5P54829 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms