Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CPT1AP50416 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.57■□□□□ 0.4
CPT1AP50416 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.57■□□□□ 0.4
CPT1AP50416 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.57■□□□□ 0.4
CPT1AP50416 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.57■□□□□ 0.4
CPT1AP50416 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.57■□□□□ 0.4
CPT1AP50416 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.57■□□□□ 0.4
CPT1AP50416 AC093813.1-201ENST00000605066 256 ntBASIC17.57■□□□□ 0.4
CPT1AP50416 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.57■□□□□ 0.4
CPT1AP50416 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.57■□□□□ 0.4
CPT1AP50416 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.57■□□□□ 0.4
CPT1AP50416 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 AC012313.1-201ENST00000593393 3059 ntBASIC17.57■□□□□ 0.4
CPT1AP50416 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CPT1AP50416 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPT1AP50416 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 AC006449.6-201ENST00000612330 2296 ntBASIC17.56■□□□□ 0.4
CPT1AP50416 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CPT1AP50416 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.56■□□□□ 0.4
CPT1AP50416 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.56■□□□□ 0.4
CPT1AP50416 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.56■□□□□ 0.4
CPT1AP50416 CROCCP1-201ENST00000426910 5675 ntBASIC17.56■□□□□ 0.4
CPT1AP50416 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.56■□□□□ 0.4
CPT1AP50416 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CPT1AP50416 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.56■□□□□ 0.4
CPT1AP50416 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.56■□□□□ 0.4
CPT1AP50416 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.56■□□□□ 0.4
CPT1AP50416 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.56■□□□□ 0.4
CPT1AP50416 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.56■□□□□ 0.4
CPT1AP50416 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.56■□□□□ 0.4
CPT1AP50416 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CPT1AP50416 AC026410.3-201ENST00000514280 936 ntBASIC17.56■□□□□ 0.4
CPT1AP50416 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.56■□□□□ 0.4
CPT1AP50416 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CPT1AP50416 MIR6869-201ENST00000619434 62 ntBASIC17.56■□□□□ 0.4
CPT1AP50416 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPT1AP50416 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CPT1AP50416 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.56■□□□□ 0.4
CPT1AP50416 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPT1AP50416 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CPT1AP50416 AC092171.3-201ENST00000610122 2651 ntBASIC17.55■□□□□ 0.4
CPT1AP50416 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPT1AP50416 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPT1AP50416 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.55■□□□□ 0.4
CPT1AP50416 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPT1AP50416 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPT1AP50416 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPT1AP50416 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPT1AP50416 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CPT1AP50416 ACKR1-201ENST00000368121 1240 ntBASIC17.55■□□□□ 0.4
CPT1AP50416 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.55■□□□□ 0.4
CPT1AP50416 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.55■□□□□ 0.4
CPT1AP50416 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CPT1AP50416 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.55■□□□□ 0.4
CPT1AP50416 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.55■□□□□ 0.4
CPT1AP50416 YBX1P6-201ENST00000442962 1002 ntBASIC17.55■□□□□ 0.4
CPT1AP50416 AC106760.1-201ENST00000508690 800 ntBASIC17.55■□□□□ 0.4
CPT1AP50416 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CPT1AP50416 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPT1AP50416 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.55■□□□□ 0.4
CPT1AP50416 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.55■□□□□ 0.4
CPT1AP50416 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms