Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.57■□□□□ 0.08
KRT6CP48668 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6CP48668 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT6CP48668 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6CP48668 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.57■□□□□ 0.08
KRT6CP48668 SLC25A1P1-201ENST00000528351 927 ntBASIC15.57■□□□□ 0.08
KRT6CP48668 FAM86C2P-203ENST00000528684 1004 ntBASIC15.57■□□□□ 0.08
KRT6CP48668 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
KRT6CP48668 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.57■□□□□ 0.08
KRT6CP48668 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6CP48668 SPTSSB-204ENST00000617024 1292 ntBASIC15.57■□□□□ 0.08
KRT6CP48668 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
KRT6CP48668 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.57■□□□□ 0.08
KRT6CP48668 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6CP48668 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6CP48668 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6CP48668 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT6CP48668 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT6CP48668 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6CP48668 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
KRT6CP48668 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6CP48668 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
KRT6CP48668 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6CP48668 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6CP48668 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6CP48668 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6CP48668 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6CP48668 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
KRT6CP48668 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6CP48668 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6CP48668 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
KRT6CP48668 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
KRT6CP48668 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
KRT6CP48668 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
KRT6CP48668 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT6CP48668 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.56■□□□□ 0.08
KRT6CP48668 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 AL671277.1-201ENST00000429656 993 ntBASIC15.56■□□□□ 0.08
KRT6CP48668 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT6CP48668 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.56■□□□□ 0.08
KRT6CP48668 AL138918.1-201ENST00000568306 659 ntBASIC15.56■□□□□ 0.08
KRT6CP48668 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
KRT6CP48668 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KRT6CP48668 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.56■□□□□ 0.08
KRT6CP48668 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KRT6CP48668 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT6CP48668 AC022532.1-201ENST00000624563 1728 ntBASIC15.56■□□□□ 0.08
KRT6CP48668 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 AC104640.1-201ENST00000562617 2109 ntBASIC15.56■□□□□ 0.08
KRT6CP48668 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT6CP48668 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT6CP48668 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6CP48668 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6CP48668 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
KRT6CP48668 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
KRT6CP48668 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.55■□□□□ 0.08
KRT6CP48668 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6CP48668 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6CP48668 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
KRT6CP48668 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6CP48668 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6CP48668 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
KRT6CP48668 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT6CP48668 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT6CP48668 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6CP48668 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6CP48668 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6CP48668 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6CP48668 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6CP48668 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT6CP48668 AC008267.7-201ENST00000624570 1194 ntBASIC15.55■□□□□ 0.08
KRT6CP48668 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms