Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.12■□□□□ 0.33
SSR1P43307 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
SSR1P43307 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSR1P43307 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SSR1P43307 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SSR1P43307 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.11■□□□□ 0.33
SSR1P43307 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.11■□□□□ 0.33
SSR1P43307 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSR1P43307 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.11■□□□□ 0.33
SSR1P43307 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SSR1P43307 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSR1P43307 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 MIR940-201ENST00000401276 94 ntBASIC17.11■□□□□ 0.33
SSR1P43307 MED15P5-201ENST00000423150 992 ntBASIC17.11■□□□□ 0.33
SSR1P43307 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.11■□□□□ 0.33
SSR1P43307 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.11■□□□□ 0.33
SSR1P43307 AC093724.1-201ENST00000448659 1027 ntBASIC17.11■□□□□ 0.33
SSR1P43307 FDX1P1-201ENST00000449115 551 ntBASIC17.11■□□□□ 0.33
SSR1P43307 AC074386.1-202ENST00000463561 864 ntBASIC17.11■□□□□ 0.33
SSR1P43307 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.11■□□□□ 0.33
SSR1P43307 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SSR1P43307 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SSR1P43307 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.11■□□□□ 0.33
SSR1P43307 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.11■□□□□ 0.33
SSR1P43307 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SSR1P43307 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SSR1P43307 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
SSR1P43307 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.11■□□□□ 0.33
SSR1P43307 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.11■□□□□ 0.33
SSR1P43307 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSR1P43307 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.11■□□□□ 0.33
SSR1P43307 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSR1P43307 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SSR1P43307 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SSR1P43307 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SSR1P43307 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SSR1P43307 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSR1P43307 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC17.1■□□□□ 0.33
SSR1P43307 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.1■□□□□ 0.33
SSR1P43307 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SSR1P43307 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.1■□□□□ 0.33
SSR1P43307 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.1■□□□□ 0.33
SSR1P43307 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.1■□□□□ 0.33
SSR1P43307 AC104581.4-201ENST00000623126 3052 ntBASIC17.1■□□□□ 0.33
SSR1P43307 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.1■□□□□ 0.33
SSR1P43307 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.1■□□□□ 0.33
SSR1P43307 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC17.1■□□□□ 0.33
SSR1P43307 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SSR1P43307 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR1P43307 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SSR1P43307 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.1■□□□□ 0.33
SSR1P43307 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.09■□□□□ 0.33
SSR1P43307 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SSR1P43307 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
SSR1P43307 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR1P43307 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SSR1P43307 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SSR1P43307 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms