Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.56■□□□□ 0.24
SCNN1AP37088 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.56■□□□□ 0.24
SCNN1AP37088 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.56■□□□□ 0.24
SCNN1AP37088 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.56■□□□□ 0.24
SCNN1AP37088 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.56■□□□□ 0.24
SCNN1AP37088 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.56■□□□□ 0.24
SCNN1AP37088 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.56■□□□□ 0.24
SCNN1AP37088 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.56■□□□□ 0.24
SCNN1AP37088 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.56■□□□□ 0.24
SCNN1AP37088 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.56■□□□□ 0.24
SCNN1AP37088 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.56■□□□□ 0.24
SCNN1AP37088 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 AC105250.1-201ENST00000509378 2057 ntBASIC16.56■□□□□ 0.24
SCNN1AP37088 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.56■□□□□ 0.24
SCNN1AP37088 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.56■□□□□ 0.24
SCNN1AP37088 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
SCNN1AP37088 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.56■□□□□ 0.24
SCNN1AP37088 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.56■□□□□ 0.24
SCNN1AP37088 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.55■□□□□ 0.24
SCNN1AP37088 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.55■□□□□ 0.24
SCNN1AP37088 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 AC114501.2-201ENST00000439631 535 ntBASIC16.55■□□□□ 0.24
SCNN1AP37088 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.55■□□□□ 0.24
SCNN1AP37088 CYMP-203ENST00000474680 1263 ntBASIC16.55■□□□□ 0.24
SCNN1AP37088 AC004890.2-204ENST00000481968 304 ntBASIC16.55■□□□□ 0.24
SCNN1AP37088 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 IGHV3-42-201ENST00000520410 361 ntBASIC16.55■□□□□ 0.24
SCNN1AP37088 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.55■□□□□ 0.24
SCNN1AP37088 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 AL390955.2-201ENST00000603032 514 ntBASIC16.55■□□□□ 0.24
SCNN1AP37088 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SCNN1AP37088 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCNN1AP37088 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.55■□□□□ 0.24
SCNN1AP37088 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.55■□□□□ 0.24
SCNN1AP37088 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
SCNN1AP37088 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 AC127383.1-201ENST00000444697 1800 ntBASIC16.54■□□□□ 0.24
SCNN1AP37088 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.54■□□□□ 0.24
SCNN1AP37088 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.54■□□□□ 0.24
SCNN1AP37088 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SCNN1AP37088 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.54■□□□□ 0.24
SCNN1AP37088 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.54■□□□□ 0.24
SCNN1AP37088 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.54■□□□□ 0.24
SCNN1AP37088 TOMM22P5-201ENST00000416399 439 ntBASIC16.54■□□□□ 0.24
SCNN1AP37088 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.54■□□□□ 0.24
SCNN1AP37088 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.54■□□□□ 0.24
SCNN1AP37088 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.54■□□□□ 0.24
SCNN1AP37088 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.54■□□□□ 0.24
SCNN1AP37088 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.54■□□□□ 0.24
SCNN1AP37088 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.54■□□□□ 0.24
SCNN1AP37088 AC106028.4-201ENST00000614509 607 ntBASIC16.54■□□□□ 0.24
SCNN1AP37088 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.54■□□□□ 0.24
SCNN1AP37088 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.54■□□□□ 0.24
SCNN1AP37088 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms