Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFRAP16234 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFRAP16234 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PDGFRAP16234 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 TUBB3P1-201ENST00000405796 1332 ntBASIC16.79■□□□□ 0.28
PDGFRAP16234 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFRAP16234 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFRAP16234 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFRAP16234 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.79■□□□□ 0.28
PDGFRAP16234 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.79■□□□□ 0.28
PDGFRAP16234 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFRAP16234 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFRAP16234 AC067863.1-201ENST00000494933 530 ntBASIC16.79■□□□□ 0.28
PDGFRAP16234 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFRAP16234 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFRAP16234 BANF1P1-201ENST00000553684 263 ntBASIC16.79■□□□□ 0.28
PDGFRAP16234 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.79■□□□□ 0.28
PDGFRAP16234 AC007967.4-201ENST00000614700 386 ntBASIC16.79■□□□□ 0.28
PDGFRAP16234 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PDGFRAP16234 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PDGFRAP16234 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFRAP16234 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFRAP16234 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFRAP16234 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PDGFRAP16234 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFRAP16234 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 REXO1L1P-202ENST00000608646 1974 ntBASIC16.78■□□□□ 0.28
PDGFRAP16234 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PDGFRAP16234 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 AC018892.3-201ENST00000623986 2499 ntBASIC16.78■□□□□ 0.28
PDGFRAP16234 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.78■□□□□ 0.28
PDGFRAP16234 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PDGFRAP16234 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PDGFRAP16234 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.78■□□□□ 0.28
PDGFRAP16234 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.78■□□□□ 0.28
PDGFRAP16234 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PDGFRAP16234 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.78■□□□□ 0.28
PDGFRAP16234 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.78■□□□□ 0.28
PDGFRAP16234 AC015911.4-201ENST00000588022 1070 ntBASIC16.78■□□□□ 0.28
PDGFRAP16234 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDGFRAP16234 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 AC105917.1-201ENST00000506637 2539 ntBASIC16.78■□□□□ 0.28
PDGFRAP16234 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PDGFRAP16234 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDGFRAP16234 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
PDGFRAP16234 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.77■□□□□ 0.28
PDGFRAP16234 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.77■□□□□ 0.28
PDGFRAP16234 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.77■□□□□ 0.28
PDGFRAP16234 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PDGFRAP16234 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDGFRAP16234 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms