Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
EPB41P11171 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.59■□□□□ 0.41
EPB41P11171 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
EPB41P11171 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.59■□□□□ 0.41
EPB41P11171 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.59■□□□□ 0.41
EPB41P11171 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
EPB41P11171 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 AL513210.1-201ENST00000629608 234 ntBASIC17.59■□□□□ 0.41
EPB41P11171 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
EPB41P11171 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPB41P11171 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.59■□□□□ 0.41
EPB41P11171 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
EPB41P11171 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EPB41P11171 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPB41P11171 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPB41P11171 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
EPB41P11171 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EPB41P11171 AP3S2-216ENST00000617003 1561 ntBASIC17.58■□□□□ 0.41
EPB41P11171 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPB41P11171 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
EPB41P11171 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
EPB41P11171 AL691432.1-201ENST00000596308 1422 ntBASIC17.58■□□□□ 0.41
EPB41P11171 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.58■□□□□ 0.4
EPB41P11171 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.58■□□□□ 0.4
EPB41P11171 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.58■□□□□ 0.4
EPB41P11171 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.58■□□□□ 0.4
EPB41P11171 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
EPB41P11171 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.58■□□□□ 0.4
EPB41P11171 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.58■□□□□ 0.4
EPB41P11171 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
EPB41P11171 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 AC063926.3-201ENST00000624734 5658 ntBASIC17.58■□□□□ 0.4
EPB41P11171 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.58■□□□□ 0.4
EPB41P11171 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
EPB41P11171 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPB41P11171 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.57■□□□□ 0.4
EPB41P11171 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EPB41P11171 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EPB41P11171 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
EPB41P11171 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
EPB41P11171 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.57■□□□□ 0.4
EPB41P11171 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
EPB41P11171 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EPB41P11171 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
EPB41P11171 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EPB41P11171 UPF3AP3-201ENST00000420996 769 ntBASIC17.57■□□□□ 0.4
EPB41P11171 KRT18P32-201ENST00000424695 1287 ntBASIC17.57■□□□□ 0.4
EPB41P11171 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.57■□□□□ 0.4
EPB41P11171 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.57■□□□□ 0.4
EPB41P11171 AC112482.1-201ENST00000492080 688 ntBASIC17.57■□□□□ 0.4
EPB41P11171 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.57■□□□□ 0.4
EPB41P11171 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.57■□□□□ 0.4
EPB41P11171 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.57■□□□□ 0.4
EPB41P11171 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
EPB41P11171 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.57■□□□□ 0.4
EPB41P11171 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.57■□□□□ 0.4
EPB41P11171 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 AC144831.1-201ENST00000573312 2656 ntBASIC17.57■□□□□ 0.4
EPB41P11171 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPB41P11171 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
EPB41P11171 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms