Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB4AP04350 PI4KAP1-204ENST00000612579 1703 ntBASIC17.2■□□□□ 0.34
TUBB4AP04350 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB4AP04350 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB4AP04350 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TUBB4AP04350 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB4AP04350 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB4AP04350 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TUBB4AP04350 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBB4AP04350 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB4AP04350 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB4AP04350 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBB4AP04350 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TUBB4AP04350 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB4AP04350 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
TUBB4AP04350 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB4AP04350 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TUBB4AP04350 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.19■□□□□ 0.34
TUBB4AP04350 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TUBB4AP04350 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.19■□□□□ 0.34
TUBB4AP04350 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.19■□□□□ 0.34
TUBB4AP04350 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
TUBB4AP04350 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 CHCHD2P8-201ENST00000429873 447 ntBASIC17.19■□□□□ 0.34
TUBB4AP04350 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.19■□□□□ 0.34
TUBB4AP04350 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.19■□□□□ 0.34
TUBB4AP04350 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.19■□□□□ 0.34
TUBB4AP04350 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.19■□□□□ 0.34
TUBB4AP04350 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.19■□□□□ 0.34
TUBB4AP04350 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
TUBB4AP04350 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TUBB4AP04350 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.19■□□□□ 0.34
TUBB4AP04350 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TUBB4AP04350 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.19■□□□□ 0.34
TUBB4AP04350 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.19■□□□□ 0.34
TUBB4AP04350 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 AL137784.3-201ENST00000623858 2288 ntBASIC17.18■□□□□ 0.34
TUBB4AP04350 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.18■□□□□ 0.34
TUBB4AP04350 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
TUBB4AP04350 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.18■□□□□ 0.34
TUBB4AP04350 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TUBB4AP04350 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.18■□□□□ 0.34
TUBB4AP04350 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.18■□□□□ 0.34
TUBB4AP04350 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.18■□□□□ 0.34
TUBB4AP04350 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.18■□□□□ 0.34
TUBB4AP04350 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.18■□□□□ 0.34
TUBB4AP04350 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.18■□□□□ 0.34
TUBB4AP04350 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TUBB4AP04350 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.18■□□□□ 0.34
TUBB4AP04350 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.18■□□□□ 0.34
TUBB4AP04350 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TUBB4AP04350 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TUBB4AP04350 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.17■□□□□ 0.34
TUBB4AP04350 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB4AP04350 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TUBB4AP04350 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB4AP04350 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB4AP04350 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB4AP04350 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.17■□□□□ 0.34
TUBB4AP04350 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB4AP04350 AC023024.2-201ENST00000623561 1993 ntBASIC17.17■□□□□ 0.34
TUBB4AP04350 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB4AP04350 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB4AP04350 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB4AP04350 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.17■□□□□ 0.34
TUBB4AP04350 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms