Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.13■□□□□ 0.01
SNX4O95219 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SNX4O95219 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.13■□□□□ 0.01
SNX4O95219 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.13■□□□□ 0.01
SNX4O95219 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.13■□□□□ 0.01
SNX4O95219 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 KRT18P28-201ENST00000453838 1332 ntBASIC15.13■□□□□ 0.01
SNX4O95219 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.13■□□□□ 0.01
SNX4O95219 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNX4O95219 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.12■□□□□ 0.01
SNX4O95219 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 HLA-A-202ENST00000376806 1854 ntBASIC15.12■□□□□ 0.01
SNX4O95219 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 ALOX12P2-203ENST00000570921 1945 ntBASIC15.12■□□□□ 0.01
SNX4O95219 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 AL627223.1-201ENST00000416693 442 ntBASIC15.12■□□□□ 0.01
SNX4O95219 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.12■□□□□ 0.01
SNX4O95219 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.12■□□□□ 0.01
SNX4O95219 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.12■□□□□ 0.01
SNX4O95219 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 AC023141.5-201ENST00000458585 616 ntBASIC15.12■□□□□ 0.01
SNX4O95219 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.12■□□□□ 0.01
SNX4O95219 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.12■□□□□ 0.01
SNX4O95219 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
SNX4O95219 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
SNX4O95219 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.12■□□□□ 0.01
SNX4O95219 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.12■□□□□ 0.01
SNX4O95219 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.12■□□□□ 0.01
SNX4O95219 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SNX4O95219 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SNX4O95219 AL161772.1-201ENST00000610494 4412 ntBASIC15.12■□□□□ 0.01
SNX4O95219 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.12■□□□□ 0.01
SNX4O95219 AL512652.2-201ENST00000625156 1716 ntBASIC15.12■□□□□ 0.01
SNX4O95219 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX4O95219 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
SNX4O95219 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SNX4O95219 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.11■□□□□ 0.01
SNX4O95219 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.11■□□□□ 0.01
SNX4O95219 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.11■□□□□ 0.01
SNX4O95219 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNX4O95219 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.11■□□□□ 0.01
SNX4O95219 LINC01225-203ENST00000563550 1244 ntBASIC15.11■□□□□ 0.01
SNX4O95219 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX4O95219 AC027307.2-201ENST00000591252 911 ntBASIC15.11■□□□□ 0.01
SNX4O95219 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.11■□□□□ 0.01
SNX4O95219 AC084121.4-201ENST00000641598 221 ntBASIC15.11■□□□□ 0.01
SNX4O95219 AF228730.8-201ENST00000642140 221 ntBASIC15.11■□□□□ 0.01
SNX4O95219 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms