Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTN3O95197 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.88■□□□□ 0.29
RTN3O95197 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RTN3O95197 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN3O95197 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN3O95197 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RTN3O95197 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTN3O95197 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN3O95197 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN3O95197 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 HAUS4P1-201ENST00000406739 1145 ntBASIC16.87■□□□□ 0.29
RTN3O95197 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.87■□□□□ 0.29
RTN3O95197 SERBP1P5-201ENST00000510079 1181 ntBASIC16.87■□□□□ 0.29
RTN3O95197 SDHAP3-202ENST00000515467 728 ntBASIC16.87■□□□□ 0.29
RTN3O95197 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.87■□□□□ 0.29
RTN3O95197 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.87■□□□□ 0.29
RTN3O95197 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.87■□□□□ 0.29
RTN3O95197 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RTN3O95197 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.87■□□□□ 0.29
RTN3O95197 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 AC105917.1-201ENST00000506637 2539 ntBASIC16.87■□□□□ 0.29
RTN3O95197 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN3O95197 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RTN3O95197 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
RTN3O95197 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RTN3O95197 AP001282.1-201ENST00000531301 1499 ntBASIC16.86■□□□□ 0.29
RTN3O95197 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.86■□□□□ 0.29
RTN3O95197 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RTN3O95197 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RTN3O95197 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RTN3O95197 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.86■□□□□ 0.29
RTN3O95197 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.86■□□□□ 0.29
RTN3O95197 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.86■□□□□ 0.29
RTN3O95197 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.86■□□□□ 0.29
RTN3O95197 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.86■□□□□ 0.29
RTN3O95197 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RTN3O95197 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.86■□□□□ 0.29
RTN3O95197 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.86■□□□□ 0.29
RTN3O95197 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RTN3O95197 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.86■□□□□ 0.29
RTN3O95197 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.86■□□□□ 0.29
RTN3O95197 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.86■□□□□ 0.29
RTN3O95197 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RTN3O95197 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.86■□□□□ 0.29
RTN3O95197 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN3O95197 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RTN3O95197 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.85■□□□□ 0.29
RTN3O95197 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.85■□□□□ 0.29
RTN3O95197 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RTN3O95197 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
RTN3O95197 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RTN3O95197 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RTN3O95197 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms