Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.17■□□□□ 0.34
CSPG5O95196 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CSPG5O95196 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CSPG5O95196 KRT43P-201ENST00000434019 910 ntBASIC17.17■□□□□ 0.34
CSPG5O95196 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.17■□□□□ 0.34
CSPG5O95196 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.17■□□□□ 0.34
CSPG5O95196 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.17■□□□□ 0.34
CSPG5O95196 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.17■□□□□ 0.34
CSPG5O95196 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.17■□□□□ 0.34
CSPG5O95196 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CSPG5O95196 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 AC020765.3-201ENST00000613051 740 ntBASIC17.17■□□□□ 0.34
CSPG5O95196 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.17■□□□□ 0.34
CSPG5O95196 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CSPG5O95196 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.17■□□□□ 0.34
CSPG5O95196 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CSPG5O95196 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CSPG5O95196 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 AC046158.3-201ENST00000624947 2558 ntBASIC17.17■□□□□ 0.34
CSPG5O95196 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CSPG5O95196 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CSPG5O95196 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.16■□□□□ 0.34
CSPG5O95196 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 GGT4P-201ENST00000623672 1708 ntBASIC17.16■□□□□ 0.34
CSPG5O95196 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CSPG5O95196 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CSPG5O95196 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 USP32P1-208ENST00000506594 1164 ntBASIC17.16■□□□□ 0.34
CSPG5O95196 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.16■□□□□ 0.34
CSPG5O95196 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.16■□□□□ 0.34
CSPG5O95196 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CSPG5O95196 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.16■□□□□ 0.34
CSPG5O95196 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.16■□□□□ 0.34
CSPG5O95196 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.16■□□□□ 0.34
CSPG5O95196 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.16■□□□□ 0.34
CSPG5O95196 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.16■□□□□ 0.34
CSPG5O95196 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.16■□□□□ 0.34
CSPG5O95196 AC015936.2-201ENST00000593177 259 ntBASIC17.16■□□□□ 0.34
CSPG5O95196 BTNL10-201ENST00000595971 695 ntBASIC17.16■□□□□ 0.34
CSPG5O95196 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CSPG5O95196 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CSPG5O95196 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
CSPG5O95196 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CSPG5O95196 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CSPG5O95196 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CSPG5O95196 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CSPG5O95196 AL133338.1-201ENST00000565695 1517 ntBASIC17.16■□□□□ 0.34
CSPG5O95196 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG5O95196 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG5O95196 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.15■□□□□ 0.34
CSPG5O95196 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG5O95196 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG5O95196 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.15■□□□□ 0.34
CSPG5O95196 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.15■□□□□ 0.34
CSPG5O95196 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CSPG5O95196 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CSPG5O95196 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
CSPG5O95196 BCYRN1-201ENST00000418539 200 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG5O95196 BCRP2-202ENST00000447763 634 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 AC099548.2-209ENST00000480264 625 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 BCRP6-201ENST00000510112 632 ntBASIC17.15■□□□□ 0.34
CSPG5O95196 BCRP7-201ENST00000511549 544 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms