Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
KDM4BO94953 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.16□□□□□ -0.14
KDM4BO94953 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.15□□□□□ -0.14
KDM4BO94953 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
KDM4BO94953 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
KDM4BO94953 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
KDM4BO94953 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KDM4BO94953 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.15□□□□□ -0.14
KDM4BO94953 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.15□□□□□ -0.14
KDM4BO94953 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.15□□□□□ -0.14
KDM4BO94953 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KDM4BO94953 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
KDM4BO94953 DUSP5P1-201ENST00000441325 1139 ntBASIC14.15□□□□□ -0.14
KDM4BO94953 AC018712.1-201ENST00000455767 687 ntBASIC14.15□□□□□ -0.14
KDM4BO94953 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KDM4BO94953 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.15□□□□□ -0.14
KDM4BO94953 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.15□□□□□ -0.14
KDM4BO94953 AC105339.3-201ENST00000560043 636 ntBASIC14.15□□□□□ -0.14
KDM4BO94953 TP73-AS1-207ENST00000624167 988 ntBASIC14.15□□□□□ -0.14
KDM4BO94953 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.15□□□□□ -0.14
KDM4BO94953 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.15□□□□□ -0.14
KDM4BO94953 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KDM4BO94953 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.15□□□□□ -0.14
KDM4BO94953 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KDM4BO94953 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KDM4BO94953 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDM4BO94953 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
KDM4BO94953 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.15□□□□□ -0.15
KDM4BO94953 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.15□□□□□ -0.15
KDM4BO94953 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
KDM4BO94953 AC087386.2-201ENST00000623212 4637 ntBASIC14.14□□□□□ -0.15
KDM4BO94953 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
KDM4BO94953 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 CICP14-201ENST00000629111 2732 ntBASIC14.14□□□□□ -0.15
KDM4BO94953 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 AC016027.1-202ENST00000607927 1699 ntBASIC14.14□□□□□ -0.15
KDM4BO94953 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
KDM4BO94953 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KDM4BO94953 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 FAM197Y8-203ENST00000450145 560 ntBASIC14.14□□□□□ -0.15
KDM4BO94953 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.14□□□□□ -0.15
KDM4BO94953 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.14□□□□□ -0.15
KDM4BO94953 AL356488.2-201ENST00000602755 427 ntBASIC14.14□□□□□ -0.15
KDM4BO94953 AL121912.1-201ENST00000603683 238 ntBASIC14.14□□□□□ -0.15
KDM4BO94953 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.14□□□□□ -0.15
KDM4BO94953 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms