Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.71■□□□□ 0.27
BEST1O76090 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
BEST1O76090 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.71■□□□□ 0.27
BEST1O76090 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.71■□□□□ 0.27
BEST1O76090 API5-211ENST00000534695 560 ntTSL 5 BASIC16.71■□□□□ 0.27
BEST1O76090 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.71■□□□□ 0.27
BEST1O76090 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.71■□□□□ 0.27
BEST1O76090 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 AL132655.2-201ENST00000596276 594 ntBASIC16.71■□□□□ 0.27
BEST1O76090 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
BEST1O76090 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 AC008894.3-201ENST00000624324 3103 ntBASIC16.71■□□□□ 0.27
BEST1O76090 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.71■□□□□ 0.27
BEST1O76090 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
BEST1O76090 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.26
BEST1O76090 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
BEST1O76090 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
BEST1O76090 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
BEST1O76090 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BEST1O76090 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST1O76090 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BEST1O76090 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST1O76090 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST1O76090 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
BEST1O76090 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.7■□□□□ 0.26
BEST1O76090 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
BEST1O76090 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
BEST1O76090 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST1O76090 PIN1P1-201ENST00000412108 996 ntBASIC16.7■□□□□ 0.26
BEST1O76090 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.7■□□□□ 0.26
BEST1O76090 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST1O76090 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.7■□□□□ 0.26
BEST1O76090 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST1O76090 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
BEST1O76090 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.7■□□□□ 0.26
BEST1O76090 AL139384.1-201ENST00000612143 3047 ntBASIC16.7■□□□□ 0.26
BEST1O76090 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BEST1O76090 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST1O76090 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.7■□□□□ 0.26
BEST1O76090 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST1O76090 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.69■□□□□ 0.26
BEST1O76090 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
BEST1O76090 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.69■□□□□ 0.26
BEST1O76090 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.69■□□□□ 0.26
BEST1O76090 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.69■□□□□ 0.26
BEST1O76090 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.69■□□□□ 0.26
BEST1O76090 CRB3P1-201ENST00000449338 276 ntBASIC16.69■□□□□ 0.26
BEST1O76090 COX20P2-201ENST00000452636 358 ntBASIC16.69■□□□□ 0.26
BEST1O76090 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BEST1O76090 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST1O76090 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.69■□□□□ 0.26
BEST1O76090 CHCHD2P3-201ENST00000603038 451 ntBASIC16.69■□□□□ 0.26
BEST1O76090 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.69■□□□□ 0.26
BEST1O76090 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST1O76090 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms